RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 NRIP3Q9NQ35 241 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 AHSPQ9NZD4 102 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ASCC3Q8N3C0 2202 aaKnown RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 A0A1W2PS29 197 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SMIM30A4D0T7 59 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 OR6C68A6NDL8 312 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 IFITM10A6NMD0 228 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 GATCO43716 136 aaKnown RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 EIF1BO60739 113 aaKnown RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 KLK3P07288 261 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 CELP19835 753 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 PEBP1P30086 187 aaKnown RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 EIF1P41567 113 aaKnown RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 EIF1AXP47813 144 aaKnown RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF84P51523 738 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 QRFPP83859 136 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 NAAAQ02083 359 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 FOXO1Q12778 655 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 NAE1Q13564 534 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 TRAM2Q15035 370 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SLC25A24Q6NUK1 477 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF529Q6P280 563 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ABHD13Q7L211 337 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 BPIFCQ8NFQ6 507 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 CTHRC1Q96CG8 243 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ERMAPQ96PL5 475 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 KCNK17Q96T54 332 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 MAP3K3Q99759 626 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 NDC1Q9BTX1 674 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ASCL3Q9NQ33 180 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SLC17A5Q9NRA2 495 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ATXN7L1Q9ULK2 861 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ETV7Q9Y603 341 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 A0A0U1RQK1 487 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF320A2RRD8 509 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 LRIT2A6NDA9 550 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 C9J4A7 227 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 LRRN3E7EW58 273 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 H7BY64 318 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ADAM10O14672 748 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 CD3GP09693 182 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 RCC1P18754 421 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 RAB13P51153 203 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SLBPQ14493 270 aaKnown RBP eCLIP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 PRTGQ2VWP7 1150 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 KLHL26Q53HC5 615 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 VWA2Q5GFL6 755 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 NSUN5P2Q63ZY6 315 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 MTFR2Q6P444 385 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 DRAM2Q6UX65 266 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 C6orf15Q6UXA7 325 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF836Q6ZNA1 936 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 OR2T35Q8NGX2 323 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 OR52I2Q8NH67 350 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SSC4DQ8WTU2 575 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 FAM46AQ96IP4 442 aaKnown RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SMIM8Q96KF7 97 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 MS4A4EQ96PG1 132 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SPRY4Q9C004 299 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 WDFY3Q8IZQ1 3526 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 CUL9Q8IWT3 2517 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 ZC3H12DA2A288 527 aaKnown RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 CDHR4A6H8M9 788 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 TXNDC12O95881 172 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 ACTL6AO96019 429 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 KLK1P06870 262 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 SNAPC1Q16533 368 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF239Q16600 458 aaKnown RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 KLHL12Q53G59 568 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 ATPAF1Q5TC12 328 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 CRIP3Q6Q6R5 217 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 ACBD7Q8N6N7 88 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 SAMD12Q8N8I0 201 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 OR5D16Q8NGK9 328 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 GPX8Q8TED1 209 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 PCNPQ8WW12 178 aaKnown RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 OTUB1Q96FW1 271 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 SCNM1Q9BWG6 230 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 TUBA4BQ9H853 241 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 FGF21Q9NSA1 209 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 FAM8A1Q9UBU6 413 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 TAC3Q9UHF0 121 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF337Q9Y3M9 751 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 ARID1BQ8NFD5 2236 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 COL6A3P12111 3177 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 TRBV23OR9-2A0A075B6M9 112 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 PYCARD-AS1I3L0S3 204 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 OR10H3O60404 316 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 IFNGP01579 166 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 HKR1P10072 659 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 BMI1P35226 326 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 GFERP55789 205 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 CSNK1G2P78368 415 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 PRR5P85299 388 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 GK2Q14410 553 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 EEF1A1P5Q5VTE0 462 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 FNDC7Q5VTL7 733 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 FCRL6Q6DN72 434 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 MUC20Q8N307 709 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms