RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GJE1A6NN92 205 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.32□□□□□ -0.28
VCAN-211ENST00000513984 WNT11O96014 354 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 CSF3P09919 207 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 FTH1P19P0C7X4 201 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 ATF1P18846 271 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 ELK1P19419 428 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 CD97P48960 835 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 TCF15Q12870 199 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 CAMK2DQ13557 499 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 POU4F3Q15319 338 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 HIST3H3Q16695 136 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 SYT9Q86SS6 491 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 ZNF676Q8N7Q3 588 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 KCNE4Q8WWG9 221 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 NKD1Q969G9 470 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 CYSLTR2Q9NS75 346 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 ABRACLQ9P1F3 81 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 TRBV5-7A0A0A0MS05 114 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 A0A0J9YW62 118 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 TRABD2BA6NFA1 517 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 GPR171O14626 319 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 PDCD5O14737 125 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 DNPH1O43598 174 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 TMEM127O75204 238 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 VAMP5O95183 116 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 SLC2A2P11168 524 aaPredicted RBP13.31□□□□□ -0.28
VCAN-211ENST00000513984 CNR1P21554 472 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 LAP3P28838 519 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 MAGEB1P43366 347 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 GPR85P60893 370 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 OC90Q02509 493 aaPredicted RBP13.31□□□□□ -0.28
VCAN-211ENST00000513984 AIMP2Q13155 320 aaKnown RBP13.31□□□□□ -0.28
VCAN-211ENST00000513984 PYDC2Q56P42 97 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 SLC25A47Q6Q0C1 308 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 DEGS2Q6QHC5 323 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 DCXRQ7Z4W1 244 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 TRMT10AQ8TBZ6 339 aaKnown RBP13.31□□□□□ -0.28
VCAN-211ENST00000513984 GPR148Q8TDV2 347 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 THRSPQ92748 146 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 NAA11Q9BSU3 229 aaPredicted RBP13.31□□□□□ -0.28
VCAN-211ENST00000513984 LRFN1Q9P244 771 aa13.31□□□□□ -0.28
VCAN-211ENST00000513984 NCOA6Q14686 2063 aaPredicted RBP13.31□□□□□ -0.28
VCAN-211ENST00000513984 A0A1W2PQ09 198 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 FAM25AB3EWG3 89 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 FAM25CB3EWG5 89 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 FAM25GB3EWG6 89 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 SRSF10O75494 262 aaKnown RBP13.3□□□□□ -0.28
VCAN-211ENST00000513984 PNPP00491 289 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 RAF1P04049 648 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 NPR2P20594 1047 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 CD82P27701 267 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 AGFG1P52594 562 aaKnown RBP13.3□□□□□ -0.28
VCAN-211ENST00000513984 FOXO1Q12778 655 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 TOMM20Q15388 145 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 P2RY14Q15391 338 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 ABHD17BQ5VST6 288 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 AGAP7PQ5VUJ5 663 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 OR7E24Q6IFN5 339 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 ZNF544Q6NX49 715 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 CATSPERDQ86XM0 798 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 SAMD12Q8N8I0 201 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 OR14L1PQ8NHC6 308 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 C11orf40Q8WZ69 217 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 ORAI1Q96D31 301 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 GFI1Q99684 422 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 OR2B2Q9GZK3 357 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 ABI3Q9P2A4 366 aa13.3□□□□□ -0.28
VCAN-211ENST00000513984 AK6Q9Y3D8 172 aaKnown RBP13.3□□□□□ -0.28
VCAN-211ENST00000513984 NEURL1O76050 574 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 PAHP00439 452 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 HLA-DQB1P01920 261 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 EIF4EP06730 217 aaKnown RBP13.29□□□□□ -0.28
VCAN-211ENST00000513984 RFPL3SP0C7P2 107 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 RBMS1P29558 406 aaKnown RBP13.29□□□□□ -0.28
VCAN-211ENST00000513984 CD96P40200 585 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 CASRP41180 1078 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 GABREP78334 506 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 SCN1BQ07699 218 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 MFGE8Q08431 387 aaPredicted RBP13.29□□□□□ -0.28
VCAN-211ENST00000513984 IL18Q14116 193 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 ASB18Q6ZVZ8 466 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 SPATC1Q76KD6 591 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 GDPD3Q7L5L3 318 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 YRDCQ86U90 279 aaKnown RBP13.29□□□□□ -0.28
VCAN-211ENST00000513984 DTX1Q86Y01 620 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 LINC00346Q8IVM7 164 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 IL22RA1Q8N6P7 574 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 IL17RDQ8NFM7 739 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 OR10H5Q8NGA6 315 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 OR10AC1Q8NH08 325 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 RNF133Q8WVZ7 376 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 HTRA1Q92743 480 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 SMAD5Q99717 465 aaKnown RBP13.29□□□□□ -0.28
VCAN-211ENST00000513984 SLC25A18Q9H1K4 315 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 ZFP64Q9NPA5 681 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 EXTL2Q9UBQ6 330 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 CYB5R1Q9UHQ9 305 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 R4GMQ9 66 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 EP300Q09472 2414 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms