RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 PITX2Q99697 317 aa13.09□□□□□ -0.31
NUP54-213ENST00000513352 APOL4Q9BPW4 351 aa13.09□□□□□ -0.31
NUP54-213ENST00000513352 NMNAT2Q9BZQ4 307 aa13.09□□□□□ -0.31
NUP54-213ENST00000513352 SIAEQ9HAT2 523 aa13.09□□□□□ -0.31
NUP54-213ENST00000513352 ZNF226Q9NYT6 803 aa13.09□□□□□ -0.31
NUP54-213ENST00000513352 PLEKHB1Q9UF11 243 aaPredicted RBP13.09□□□□□ -0.31
NUP54-213ENST00000513352 NDRG4Q9ULP0 352 aaKnown RBP13.09□□□□□ -0.31
NUP54-213ENST00000513352 ANKHD1Q8IWZ3 2542 aaKnown RBP13.09□□□□□ -0.31
NUP54-213ENST00000513352 ARPC4-TTLL3A0A0A6YYG9 625 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 M0R1B8 84 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 UBL3O95164 117 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 RAB36O95755 333 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 THBDP07204 575 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 PATE4P0C8F1 98 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.32
NUP54-213ENST00000513352 COL8A1P27658 744 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 FMO3P31513 532 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 CAPGP40121 348 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 VHLP40337 213 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 IL5RAQ01344 420 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 TEKQ02763 1124 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 HSF2Q03933 536 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 SLC36A2Q495M3 483 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 TTC23Q5W5X9 447 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 TMEM53Q6P2H8 277 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 UGT2A3Q6UWM9 527 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 LYPD4Q6UWN0 246 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 FOXL2NBQ6ZUU3 175 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 ZNF627Q7L945 461 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 CCDC36Q8IYA8 594 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 OR8J1Q8NGP2 316 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 FAM222BQ8WU58 562 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 ZNRF4Q8WWF5 429 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 C11orf40Q8WZ69 217 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 PTP4A1Q93096 173 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 ZMYND19Q96E35 227 aaPredicted RBP13.08□□□□□ -0.32
NUP54-213ENST00000513352 DACH2Q96NX9 599 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 PSMG3-AS1Q96PY0 264 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 ADI1Q9BV57 179 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 SLC24A3Q9HC58 644 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 OBP2BQ9NPH6 170 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 RASSF1Q9NS23 344 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 DNAJC27Q9NZQ0 273 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 SLC25A15Q9Y619 301 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 PKDREJQ9NTG1 2253 aa13.08□□□□□ -0.32
NUP54-213ENST00000513352 C12orf71A8MTZ7 269 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 SLC16A6O15403 523 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 PRODHO43272 600 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 GLCEO94923 617 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 CLIC3O95833 236 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 SCG5P05408 212 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 GAAP10253 952 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 ZNF823P16415 610 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 IGFBP2P18065 325 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 ADAM8P78325 824 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 KEAP1Q14145 624 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 SNCBQ16143 134 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 GSG1Q2KHT4 349 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 NRN1LQ496H8 165 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 C6orf52Q5T4I8 152 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 LCN1P1Q5VSP4 162 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 C22orf34Q6ZV56 151 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 MDP1Q86V88 176 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 ERI1Q8IV48 349 aaKnown RBP13.07□□□□□ -0.32
NUP54-213ENST00000513352 GID4Q8IVV7 300 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 ZNF511Q8NB15 262 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 SLC26A10Q8NG04 563 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 UBE2FQ969M7 185 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 ZNF416Q9BWM5 594 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 CDADC1Q9BWV3 514 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 NGBQ9NPG2 151 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 MOKQ9UQ07 419 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 ADGRG4Q8IZF6 3080 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 COL12A1Q99715 3063 aa13.07□□□□□ -0.32
NUP54-213ENST00000513352 USP9YO00507 2555 aaPredicted RBP13.06□□□□□ -0.32
NUP54-213ENST00000513352 ZNF503-AS2A6NEH8 195 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 CST2P09228 141 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 SPARCP09486 303 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 EPXP11678 715 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 GSTT1P30711 240 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 IDH3GP51553 393 aaPredicted RBP13.06□□□□□ -0.32
NUP54-213ENST00000513352 BLVRAP53004 296 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 CDH11P55287 796 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 PCBD1P61457 104 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 RAB1AP62820 205 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 ENDOGQ14249 297 aaKnown RBP13.06□□□□□ -0.32
NUP54-213ENST00000513352 SLC35D3Q5M8T2 416 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 FAM27BQ5VT28 67 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 NXNL2Q5VZ03 156 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 B3GLCTQ6Y288 498 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 SSX8Q7RTT4 187 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 DPPA2Q7Z7J5 298 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 LINC00346Q8IVM7 164 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 SETD9Q8NE22 299 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 OR6N2Q8NGY6 317 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 OR2AJ1Q8NGZ0 328 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 FGFBP3Q8TAT2 258 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 FBXO17Q96EF6 278 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 BOD1Q96IK1 185 aa13.06□□□□□ -0.32
NUP54-213ENST00000513352 SPOCK3Q9BQ16 436 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms