RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ABHD17BQ5VST6 288 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 CLEC9AQ6UXN8 241 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 DPY19L2P2Q6ZN68 376 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 SHISA6Q6ZSJ9 500 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 LAS2Q8IYD9 372 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 SIRT6Q8N6T7 355 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 PLPP5Q8NEB5 264 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 GLYATL2Q8WU03 294 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 EDAQ92838 391 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 AP1S3Q96PC3 154 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 OCSTAMPQ9BR26 566 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 LMF2Q9BU23 707 aaKnown RBP10.31□□□□□ -0.76
TCOF1-211ENST00000513346 SLC25A31Q9H0C2 315 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 GPR55Q9Y2T6 319 aaPredicted RBP10.31□□□□□ -0.76
TCOF1-211ENST00000513346 RHBDD3Q9Y3P4 386 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 URGCP-MRPS24S4R325 110 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 SLC5A10A0PJK1 596 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 TMEM218A2RU14 115 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 RNASEK-C17orf49H0YIS7 233 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 GPR31O00270 319 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 JTBO76095 146 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 HPXP02790 462 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 TACR3P29371 465 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 F2RL1P55085 397 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 TAS2R46P59540 309 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 CARD17Q5XLA6 110 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 PARM1Q6UWI2 310 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 NHLRC1Q6VVB1 395 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 Q6ZRG5 221 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 DPY19L4Q7Z388 723 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 ADGRE4PQ86SQ3 457 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 C10orf111Q8N326 155 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 NMNAT2Q9BZQ4 307 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 RNF32Q9H0A6 362 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 WDR76Q9H967 626 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 A0A1B0GWA3 101 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF587BE7ETH6 402 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 GLCEO94923 617 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 HBE1P02100 147 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 GLULP15104 373 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 PJVKQ0ZLH3 352 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 IHHQ14623 411 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 NR0B2Q15466 257 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 MANEAQ5SRI9 462 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 OPN5Q6U736 354 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF687Q8N1G0 1237 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 OR9K2Q8NGE7 335 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 PFN4Q8NHR9 129 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 NAA11Q9BSU3 229 aaPredicted RBP10.3□□□□□ -0.76
TCOF1-211ENST00000513346 SELENOIQ9C0D9 397 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 TRBV5-4A0A0C4DH59 114 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 EPHA4P54764 986 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 LIPNQ5VXI9 398 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 LAIR1Q6GTX8 287 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 OR6K3Q8NGY3 331 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 HDAC8Q9BY41 377 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 GHITMQ9H3K2 345 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 MIOXQ9UGB7 285 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 PLPP2O43688 288 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 SLC16A7O60669 478 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 SRFP11831 508 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 RPA2P15927 270 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 SDHBP21912 280 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 GZMMP51124 257 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 SELENOVP59797 346 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 RIN1Q13671 783 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 CD300LDQ6UXZ3 194 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF695Q8IW36 515 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 TAAR8Q969N4 342 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 MMP26Q9NRE1 261 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 NTMQ9P121 344 aa10.3□□□□□ -0.76
TCOF1-211ENST00000513346 ATAD5Q96QE3 1844 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 TMEM269A0A1B0GVZ9 245 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 FITM1A5D6W6 292 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 MAGEB4O15481 346 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 MT-ND4LP03901 98 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 CHRM4P08173 479 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 CPMP14384 443 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 MFGE8Q08431 387 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 GPNMBQ14956 572 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF705AQ6ZN79 300 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 HSD17B11Q8NBQ5 300 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 OR1S2Q8NGQ3 325 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 OR1J1Q8NGS3 322 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 RAB22AQ9UL26 194 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 CCL27Q9Y4X3 112 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 XRCC3O43542 346 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 CTSLP07711 333 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF16P17020 682 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 SNRPNP63162 240 aaKnown RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 REEP5Q00765 189 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 SSBP1Q04837 148 aaKnown RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF77Q15935 545 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF836Q6ZNA1 936 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 PLPP7Q8NBV4 271 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 SLC16A11Q8NCK7 471 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 NICN1Q9BSH3 213 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 NTNG1Q9Y2I2 539 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 MED16Q9Y2X0 877 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 SLC22A7Q9Y694 548 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms