RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ZNF726A6NNF4 738 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 HNRNPCL2B2RXH8 293 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 HNRNPCL3B7ZW38 293 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 M0QZ24 198 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 TIMM23O14925 209 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 HNRNPCL1O60812 293 aaKnown RBP11.76□□□□□ -0.53
SPCS3-204ENST00000513139 MFN2O95140 757 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 HNRNPCL4P0DMR1 293 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 OR8G3PP0DMU2 310 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 ZNF12P17014 697 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 CALB2P22676 271 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 GSK3BP49841 420 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 ZNF81P51508 661 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 PMS2P3Q13401 168 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 TSTQ16762 297 aaKnown RBP11.76□□□□□ -0.53
SPCS3-204ENST00000513139 FBLN7Q53RD9 439 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 C17orf107Q6ZR85 190 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 DEFB107AQ8IZN7 70 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 SLC22A24Q8N4F4 322 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 PAQR4Q8N4S7 273 aaPredicted RBP11.76□□□□□ -0.53
SPCS3-204ENST00000513139 RNF148Q8N7C7 305 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 LSMEM1Q8N8F7 131 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 OR1J2Q8NGS2 313 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 FGFBP3Q8TAT2 258 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 DNAJA4Q8WW22 397 aaPredicted RBP11.76□□□□□ -0.53
SPCS3-204ENST00000513139 TXNDC15Q96J42 360 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 CDRT15Q96T59 188 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 CITED1Q99966 193 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 MRI1Q9BV20 369 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 CDH20Q9HBT6 801 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 BCL2L10Q9HD36 194 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 UBAP1Q9NZ09 502 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 RPS6KB2Q9UBS0 482 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 INSIG2Q9Y5U4 225 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 TRAPPC2LH3BP13 241 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 ADH4P08319 380 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 PATE4P0C8F1 98 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 PPIAL4GP0DN37 164 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 MAKP20794 623 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 MSX2P35548 267 aaPredicted RBP11.75□□□□□ -0.53
SPCS3-204ENST00000513139 CSNK1A1P48729 337 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 ERVS71-1P61550 626 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 PUDPQ08623 228 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 LAPTM4AQ15012 233 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 TBC1D28Q2M2D7 210 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 VMACQ2NL98 169 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 SPATC1Q76KD6 591 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 ARPINQ7Z6K5 226 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 PXKQ7Z7A4 578 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 PGAM4Q8N0Y7 254 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 HIPK4Q8NE63 616 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 OR2T12Q8NG77 320 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 BBS10Q8TAM1 723 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 EGLN1Q9GZT9 426 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 LRMDAQ9H2I8 198 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 BEX1Q9HBH7 125 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 SPAG4Q9NPE6 437 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 MRPL39Q9NYK5 338 aaKnown RBP11.75□□□□□ -0.53
SPCS3-204ENST00000513139 TAS2R1Q9NYW7 299 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.75□□□□□ -0.53
SPCS3-204ENST00000513139 ABCD2Q9UBJ2 740 aa11.75□□□□□ -0.53
SPCS3-204ENST00000513139 IGKV1D-42A0A075B6H8 117 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 PRORSD1PA6NEY8 169 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 A8MXK9 166 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 FAM220BPB1ANY3 271 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 M0QX08 132 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 TPST1O60507 370 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 FARS2O95363 451 aaKnown RBP11.74□□□□□ -0.53
SPCS3-204ENST00000513139 IGHV1-46P01743 117 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 OMGP23515 440 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 PCGF2P35227 344 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 LIPAP38571 399 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 MMP15P51511 669 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 PCBP3P57721 371 aaKnown RBP11.74□□□□□ -0.53
SPCS3-204ENST00000513139 BNIP1Q12981 228 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 TMEM53Q6P2H8 277 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 C16orf89Q6UX73 402 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 MICU2Q8IYU8 434 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 FAM156AQ8NDB6 213 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 OR4F5Q8NH21 305 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 GTF3AQ92664 365 aaKnown RBP11.74□□□□□ -0.53
SPCS3-204ENST00000513139 TAF15Q92804 592 aaKnown RBP eCLIP11.74□□□□□ -0.53
SPCS3-204ENST00000513139 TMEM54Q969K7 222 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 EPYCQ99645 322 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 ASPNQ9BXN1 380 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 OR51B6Q9H340 312 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 TMEM38BQ9NVV0 291 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 ANGPT4Q9Y264 503 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 AP3M1Q9Y2T2 418 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 NPTNQ9Y639 398 aa11.74□□□□□ -0.53
SPCS3-204ENST00000513139 A0A1B0GWA3 101 aa11.73□□□□□ -0.53
SPCS3-204ENST00000513139 PLSCR5A0PG75 271 aa11.73□□□□□ -0.53
SPCS3-204ENST00000513139 ELOVL7A1L3X0 281 aa11.73□□□□□ -0.53
SPCS3-204ENST00000513139 IGHV2-70P01814 119 aa11.73□□□□□ -0.53
SPCS3-204ENST00000513139 BGLAPP02818 100 aa11.73□□□□□ -0.53
SPCS3-204ENST00000513139 OPN1SWP03999 348 aa11.73□□□□□ -0.53
SPCS3-204ENST00000513139 CCL2P13500 99 aa11.73□□□□□ -0.53
SPCS3-204ENST00000513139 ETS2P15036 469 aa11.73□□□□□ -0.53
SPCS3-204ENST00000513139 CBLP22681 906 aa11.73□□□□□ -0.53
SPCS3-204ENST00000513139 SLC6A9P48067 706 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms