RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 CCL2P13500 99 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 APEHP13798 732 aaKnown RBP13.75□□□□□ -0.21
DDX41-214ENST00000512334 CTLA4P16410 223 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 ZNF32P17041 273 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 MSR1P21757 451 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 NR4A1P22736 598 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 APLNRP35414 380 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 NUDT6P53370 316 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 MICAQ29983 383 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 CLEC12BQ2HXU8 276 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 TBC1D28Q2M2D7 210 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 MST1LQ2TV78 715 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 PABPC1L2AQ5JQF8 200 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 CLEC12AQ5QGZ9 265 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 LEG1Q6P5S2 330 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 OR52L1Q8NGH7 329 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 OR1J2Q8NGS2 313 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 BDH2Q9BUT1 245 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 LRMDAQ9H2I8 198 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 C1orf198Q9H425 327 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 EGLN3Q9H6Z9 239 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 POLE4Q9NR33 117 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 SLC7A8Q9UHI5 535 aa13.75□□□□□ -0.21
DDX41-214ENST00000512334 B9A039 149 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 H7C1Q1 480 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 H7C417 338 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 IMPA2O14732 288 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 SSX4O60224 188 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 GPRIN2O60269 458 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 KHDRBS3O75525 346 aaKnown RBP13.74□□□□□ -0.21
DDX41-214ENST00000512334 CST2P09228 141 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 CCNOP22674 350 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 APEX1P27695 318 aaKnown RBP13.74□□□□□ -0.21
DDX41-214ENST00000512334 CDKN2AP42771 156 aaKnown RBP13.74□□□□□ -0.21
DDX41-214ENST00000512334 CENPAP49450 140 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 PCBD1P61457 104 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 SWI5Q1ZZU3 235 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 RPL13AP3Q6NVV1 102 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 FOXL2NBQ6ZUU3 175 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 OR10G2Q8NGC3 310 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 OR4K13Q8NH42 304 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 AKR7LQ8NHP1 331 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 VRK1Q99986 396 aaPredicted RBP13.74□□□□□ -0.21
DDX41-214ENST00000512334 OR51B6Q9H340 312 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 PLK3Q9H4B4 646 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 EMC7Q9NPA0 242 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 TBC1D23Q9NUY8 699 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 VSX1Q9NZR4 365 aaPredicted RBP13.74□□□□□ -0.21
DDX41-214ENST00000512334 COA3Q9Y2R0 106 aaPredicted RBP13.74□□□□□ -0.21
DDX41-214ENST00000512334 CMAHPQ9Y471 501 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 CDH10Q9Y6N8 788 aa13.74□□□□□ -0.21
DDX41-214ENST00000512334 C12orf71A8MTZ7 269 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 SMAD7O15105 426 aaKnown RBP13.73□□□□□ -0.21
DDX41-214ENST00000512334 ARPC3O15145 178 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 RENP00797 406 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 SCG5P05408 212 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 FAM157BP0CG42 384 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 HIST1H1CP16403 213 aaKnown RBP13.73□□□□□ -0.21
DDX41-214ENST00000512334 HOXB6P17509 224 aaKnown RBP13.73□□□□□ -0.21
DDX41-214ENST00000512334 CRABP1P29762 137 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 RPS23P62266 143 aaKnown RBP13.73□□□□□ -0.21
DDX41-214ENST00000512334 PSG4Q00888 419 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 EFNB3Q15768 340 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 ZNF770Q6IQ21 691 aaPredicted RBP13.73□□□□□ -0.21
DDX41-214ENST00000512334 DNM1P34Q6PK57 102 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 SVOPLQ8N434 492 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 PAQR4Q8N4S7 273 aaPredicted RBP13.73□□□□□ -0.21
DDX41-214ENST00000512334 ICA1LQ8NDH6 482 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 CPEB3Q8NE35 698 aaKnown RBP13.73□□□□□ -0.21
DDX41-214ENST00000512334 SDR9C7Q8NEX9 313 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 C18orf12Q96KH6 178 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 NMNAT3Q96T66 252 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 ZNF416Q9BWM5 594 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 OR2H1Q9GZK4 316 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 NUAK2Q9H093 628 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 YY1AP1Q9H869 796 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 DLL4Q9NR61 685 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 TIMM10BQ9Y5J6 103 aa13.73□□□□□ -0.21
DDX41-214ENST00000512334 MAP1AP78559 2803 aaPredicted RBP13.73□□□□□ -0.21
DDX41-214ENST00000512334 TCRBV3S1A0A5B6 114 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 FKBP6O75344 327 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 E2F6O75461 281 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 FOSL1P15407 271 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 GSTM3P21266 225 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 STOMP27105 288 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 GLRXP35754 106 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 GDI2P50395 445 aaKnown RBP13.72□□□□□ -0.21
DDX41-214ENST00000512334 CBX1P83916 185 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 TNK1Q13470 666 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 ENDOGQ14249 297 aaKnown RBP13.72□□□□□ -0.21
DDX41-214ENST00000512334 SLC35F1Q5T1Q4 408 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 OTPQ5XKR4 325 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 UGT2A3Q6UWM9 527 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 RASSF6Q6ZTQ3 369 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.72□□□□□ -0.21
DDX41-214ENST00000512334 GLB1L2Q8IW92 636 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 ALDH16A1Q8IZ83 802 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 CIARTQ8N365 385 aaPredicted RBP13.72□□□□□ -0.21
DDX41-214ENST00000512334 GIPC3Q8TF64 312 aa13.72□□□□□ -0.21
DDX41-214ENST00000512334 TSSK2Q96PF2 358 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms