RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 IER3IP1Q9Y5U9 82 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 IQCMA0A1B0GVH7 501 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 TCRBV5S2A0A599 114 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 XKRYO14609 159 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 OR10H3O60404 316 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 PPP1R3DO95685 299 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 CLPTM1O96005 669 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 CTLA4P16410 223 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 CCNOP22674 350 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 CALB2P22676 271 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 PDLIM4P50479 330 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 MNAT1P51948 309 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 DSCR9P59020 149 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 PSG4Q00888 419 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 MS4A2Q01362 244 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 PLP2Q04941 152 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 PPP1R8Q12972 351 aaKnown RBP14.17□□□□□ -0.14
DDX41-213ENST00000512027 ENDOGQ14249 297 aaKnown RBP14.17□□□□□ -0.14
DDX41-213ENST00000512027 TBC1D28Q2M2D7 210 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 FAM27BQ5VT28 67 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 FOXL2NBQ6ZUU3 175 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 PTCHD4Q6ZW05 846 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 DPPA2Q7Z7J5 298 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 FANK1Q8TC84 345 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 ZNF416Q9BWM5 594 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 WNT5BQ9H1J7 359 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 SYT4Q9H2B2 425 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 KCNN2Q9H2S1 579 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 RERGLQ9H628 205 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 IL1RAPQ9NPH3 570 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 NRIP3Q9NQ35 241 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 ACTR3BQ9P1U1 418 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 DUSP13Q9UII6 198 aa14.17□□□□□ -0.14
DDX41-213ENST00000512027 LOC100509620A0A075B734 347 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 PRSS37A4D1T9 235 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 VSTM5A8MXK1 200 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 LYNX1G3V0Z9 82 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 GPANK1O95872 356 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 LCKP06239 509 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 LYNX1P0DP58 116 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 SLC25A16P16260 332 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 SDHAP31040 664 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 APLNRP35414 380 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 RPS23P62266 143 aaKnown RBP14.16□□□□□ -0.14
DDX41-213ENST00000512027 GGTLC2Q14390 218 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 RGS7BPQ6MZT1 257 aaPredicted RBP14.16□□□□□ -0.14
DDX41-213ENST00000512027 ZNF774Q6NX45 483 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 CCDC124Q96CT7 223 aaKnown RBP14.16□□□□□ -0.14
DDX41-213ENST00000512027 GPX7Q96SL4 187 aaPredicted RBP14.16□□□□□ -0.14
DDX41-213ENST00000512027 OR2H1Q9GZK4 316 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 RAB1BQ9H0U4 201 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 KRCC1Q9NPI7 259 aaPredicted RBP14.16□□□□□ -0.14
DDX41-213ENST00000512027 POLE4Q9NR33 117 aa14.16□□□□□ -0.14
DDX41-213ENST00000512027 JMJD1CQ15652 2540 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 A0A1W2PPW3 197 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 VWC2LB2RUY7 222 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 M0R233 179 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 SYNGR3O43761 229 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 MPZL1O95297 269 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 SNAP29O95721 258 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 CST2P09228 141 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 CSF3P09919 207 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 DAOP14920 347 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 MSR1P21757 451 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 STOMP27105 288 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 WNT5AP41221 380 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 CDKN2AP42771 156 aaKnown RBP14.15□□□□□ -0.14
DDX41-213ENST00000512027 SMIM11AP58511 58 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 GLO1Q04760 184 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 TMEM249Q2WGJ8 235 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 SPATS1Q496A3 300 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 SPATA46Q5T0L3 261 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 SMARCD3Q6STE5 483 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 ZNF101Q8IZC7 436 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 OR9Q2Q8NGE9 314 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 FNDC8Q8TC99 324 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 POM121L2Q96KW2 1035 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 SAMD8Q96LT4 415 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 TSSK2Q96PF2 358 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 PIMREGQ9BSJ6 248 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 NDEL1Q9GZM8 345 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 OR52D1Q9H346 318 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 C1orf198Q9H425 327 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 VNN3Q9NY84 501 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 TAS2R1Q9NYW7 299 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 COA3Q9Y2R0 106 aaPredicted RBP14.15□□□□□ -0.14
DDX41-213ENST00000512027 LYVE1Q9Y5Y7 322 aa14.15□□□□□ -0.14
DDX41-213ENST00000512027 C5orf49A4QMS7 147 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 DCTN6O00399 190 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 SLC16A7O60669 478 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 PTHP01270 115 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 TP53P04637 393 aaPredicted RBP14.14□□□□□ -0.15
DDX41-213ENST00000512027 NAT2P11245 290 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 FPR3P25089 353 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 UCP2P55851 309 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 PPP2R2BQ00005 443 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 LOXL1Q08397 574 aaPredicted RBP14.14□□□□□ -0.15
DDX41-213ENST00000512027 LCN8Q6JVE9 175 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 PGBD2Q6P3X8 592 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 DPY19L2P2Q6ZN68 376 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms