RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 TPBGQ13641 420 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 MEP1BQ16820 701 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SFTPA2Q8IWL1 248 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SFTPA1Q8IWL2 248 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 ETFBKMTQ8IXQ9 262 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 OR2M7Q8NG81 312 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 ELF4Q99607 663 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 MUTYHQ9UIF7 546 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 ZFP92A6NM28 416 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 IDSB3KWA1 339 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SIRPB1O00241 398 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SLCO2B1O94956 709 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 C1SP09871 688 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 TBXA2RP21731 343 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 HOXD9P28356 352 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 ZNF91Q05481 1191 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 EXOSC2Q13868 293 aaKnown RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 ELAVL1Q15717 326 aaKnown RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 ALKBH6Q3KRA9 238 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 GDPGP1Q6ZNW5 385 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 FCRLAQ7L513 359 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 OR2AK2Q8NG84 335 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 OR5M9Q8NGP3 310 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 TMEM163Q8TC26 289 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SLC37A2Q8TED4 501 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 DPH3Q96FX2 82 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SARGQ9BW04 601 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 NRSN2Q9GZP1 204 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 C6orf106Q9H6K1 298 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 NT5DC2Q9H857 520 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 CD300AQ9UGN4 299 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 NPTNQ9Y639 398 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SLCO1B1Q9Y6L6 691 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 COL11A2P13942 1736 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 A0A096LPE4 126 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 A0A1W2PPZ6 126 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 BHLHE40O14503 412 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 GPR37O15354 613 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 CRXO43186 299 aaPredicted RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 GUSBP08236 651 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 GIFP27352 417 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 SSTR4P31391 388 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 APOBEC1P41238 236 aaKnown RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 MAP2K6P52564 334 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 DLX5P56178 289 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 OR10A3P58181 314 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 RHOBP62745 196 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 PHLDA2Q53GA4 152 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 BEX5Q5H9J7 111 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 C1orf140Q5VVS0 124 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 PLAG1Q6DJT9 500 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 GRINAQ7Z429 371 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 C17orf78Q8N4C9 275 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 SUMF1Q8NBK3 374 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 OR52N5Q8NH56 324 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 TAAR9Q96RI9 348 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 KIF13BQ9NQT8 1826 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 GREB1LQ9C091 1923 aaPredicted RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 A0A0B4J203 849 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 UBBP0CG47 229 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 APEHP13798 732 aaKnown RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 CD68P34810 354 aaPredicted RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 ZNF266Q14584 549 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 IHHQ14623 411 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 ZNF750Q32MQ0 723 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 LSRQ86X29 649 aaPredicted RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 KDM8Q8N371 416 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 GRAMD2BQ96HH9 432 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 ZNF71Q9NQZ8 489 aaPredicted RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 ZNF835Q9Y2P0 537 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 MYO18AQ92614 2054 aaKnown RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 NRXN2Q9P2S2 1712 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 DBX1A6NMT0 343 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 CTXN2P0C2S0 81 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 AOAHP28039 575 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 GCAP28676 217 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 RFC3P40938 356 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 KCNAB1Q14722 419 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 Q56UQ5 140 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 ZNF628Q5EBL2 1059 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 ADAMTSL4Q6UY14 1074 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 IDO2Q6ZQW0 420 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 SLC36A1Q7Z2H8 476 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 ZNF546Q86UE3 836 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 ZNF573Q86YE8 665 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 B3GNT7Q8NFL0 401 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 TNFRSF13CQ96RJ3 184 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 ZNF436Q9C0F3 470 aaPredicted RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 OR2B2Q9GZK3 357 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 EIF2DP41214 584 aaKnown RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 RPL35P42766 123 aaKnown RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 MNX1P50219 401 aaPredicted RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 CLDN15P56746 228 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 PROX2Q3B8N5 592 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 GLYR1Q49A26 553 aaPredicted RBP5.3□□□□□ -1.56
USP38-203ENST00000511739 ZNF385BQ569K4 471 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 PLXDC2Q6UX71 529 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 KMT5CQ86Y97 462 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 SPEM1Q8N4L4 309 aa5.3□□□□□ -1.56
USP38-203ENST00000511739 FBXO27Q8NI29 283 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms