RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 C9orf135Q5VTT2 229 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 NPSR1Q6W5P4 371 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 Q6ZPB1 254 aaPredicted RBP8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 MEPCEQ7L2J0 689 aaKnown RBP8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 JAGN1Q8N5M9 183 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 TMEM99Q8N816 258 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 NKAIN3Q8N8D7 197 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 MBD3L2Q8NHZ7 208 aaPredicted RBP8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 ABHD5Q8WTS1 349 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 MZB1Q8WU39 189 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 CTHRC1Q96CG8 243 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 ZDHHC11Q9H8X9 412 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 BRD7Q9NPI1 651 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 FAM53CQ9NYF3 392 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 B4DXG7 233 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 SHOX2O60902 331 aaPredicted RBP8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 NXPH2O95156 264 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 RAB40BQ12829 278 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 ZNF74Q16587 644 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 RBMXL3Q8N7X1 1067 aaKnown RBP8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 OR51F2Q8NH61 342 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 FAM46BQ96A09 425 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 CA10Q9NS85 328 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 TAAR3PQ9P1P4 343 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 SH2B3Q9UQQ2 575 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 RNF24Q9Y225 148 aa8.63□□□□□ -1.03
POLR2J3-215ENST00000511313 M0R135 149 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 LIPFP07098 398 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 CT45A8P0DMV1 189 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 CT45A9P0DMV2 189 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 SDC2P34741 201 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 ZNF81P51508 661 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 PIN1Q13526 163 aaPredicted RBP8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 MICBQ29980 383 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 CT45A2Q5DJT8 189 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 PYHIN1Q6K0P9 492 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 CCDC144NLQ6NUI1 221 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 BPIFB6Q8NFQ5 453 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 OR56B2PQ8NGI1 322 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 UBASH3BQ8TF42 649 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 ZNF799Q96GE5 643 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 ZNF385DQ9H6B1 395 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 ZMAT3Q9HA38 289 aaKnown RBP8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 SAP30LQ9HAJ7 183 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 C1RLQ9NZP8 487 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 IGKV1-8A0A0C4DH67 115 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 ZNF816-ZNF321PA0A0X1KG74 233 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 SH2D1BO14796 132 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 GABRA2P47869 451 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 GUCA2AQ02747 115 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 RIMKLAQ8IXN7 391 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 FAM169BQ8N8A8 192 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 CYB561A3Q8NBI2 242 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 APCDD1LQ8NCL9 501 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 C19orf18Q8NEA5 215 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 C3orf49Q96BT1 292 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 PLPPR2Q96GM1 343 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 LRCH1Q9Y2L9 728 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 GOLGB1Q14789 3259 aaKnown RBP8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 RBMXL2O75526 392 aaKnown RBP8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 GATA3P23771 443 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 EGR3Q06889 387 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 ZNF517Q6ZMY9 492 aaPredicted RBP8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 TMPRSS11FQ6ZWK6 438 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 TCEANCQ8N8B7 351 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 OR4D6Q8NGJ1 314 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 OR5AK2Q8NH90 309 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 SETD6Q8TBK2 473 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 GAL3ST2Q9H3Q3 398 aa8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 PLEKHB1Q9UF11 243 aaPredicted RBP8.62□□□□□ -1.03
POLR2J3-215ENST00000511313 J3QLW9 94 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 ZNF19P17023 458 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 OR1E2P47887 323 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 GSSP48637 474 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 POU3F4P49335 361 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 PPP1CBP62140 327 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 APOFQ13790 326 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 SLC35F1Q5T1Q4 408 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 ZDHHC23Q8IYP9 409 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 FADS6Q8N9I5 356 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 ASCC1Q8N9N2 400 aaKnown RBP8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 PSMF1Q92530 271 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 FAM168AQ92567 244 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 ADAM19Q9H013 955 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 LPAR2Q9HBW0 351 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 GPR35Q9HC97 309 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 PTGDR2Q9Y5Y4 395 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 RAE1P78406 368 aaKnown RBP8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 SKP2Q13309 424 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 ZNF846Q147U1 533 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 TAB1Q15750 504 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 ZBTB37Q5TC79 503 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 RAB12Q6IQ22 244 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 TUSC5Q8IXB3 177 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 PIGCQ92535 297 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 SUCNR1Q9BXA5 334 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 MS4A7Q9GZW8 240 aaPredicted RBP8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 ACOT13Q9NPJ3 140 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 ZC4H2Q9NQZ6 224 aa8.61□□□□□ -1.03
POLR2J3-215ENST00000511313 ARMC1Q9NVT9 282 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms