RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 LIPT2A6NK58 231 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 DEFB108AA8MXU0 73 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 KDM4EB2RXH2 506 aaPredicted RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 C19orf84I3L1E1 186 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 KCNAB3O43448 404 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 DOK2O60496 412 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 CELA3AP09093 270 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 H2BFMP0C1H6 154 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 CT45A8P0DMV1 189 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 CT45A9P0DMV2 189 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 IFI30P13284 250 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 SDC1P18827 310 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 FUT1P19526 365 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 PRKACBP22694 351 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 GIPRP48546 466 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 CMC4P56277 68 aaPredicted RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 RPS16P62249 146 aaKnown RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 SLC35A2P78381 396 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 MRPS34P82930 218 aaKnown RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 TMEM267Q0VDI3 215 aaPredicted RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 SKP2Q13309 424 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 TOP3AQ13472 1001 aaPredicted RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 KRR1Q13601 381 aaKnown RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 LRRC23Q53EV4 343 aaPredicted RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 CT45A2Q5DJT8 189 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 RTL6Q6ICC9 239 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF474Q6S9Z5 364 aaPredicted RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 TREML4Q6UXN2 200 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 NPSR1Q6W5P4 371 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 DCDC5Q6ZRR9 648 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 DPY19L4Q7Z388 723 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 KRT77Q7Z794 578 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 CELF2-AS1Q8N7Q2 184 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 ZBTB8BQ8NAP8 495 aaPredicted RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 ADAMTS16Q8TE57 1224 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 RAB40AQ8WXH6 277 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 DYRK2Q92630 601 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 PHF21AQ96BD5 680 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 TMIGD2Q96BF3 282 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 TMEM19Q96HH6 336 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 NSMCE2Q96MF7 247 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 UQCC2Q9BRT2 126 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 C1orf50Q9BV19 199 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 JAM3Q9BX67 310 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 DNTTIP1Q9H147 329 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 PCDHAC1Q9H158 963 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 HIPK2Q9H2X6 1198 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 GAL3ST2Q9H3Q3 398 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF696Q9H7X3 374 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 PATZ1Q9HBE1 687 aaKnown RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 FAM118AQ9NWS6 357 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 MPC1Q9Y5U8 109 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 DNAJC13O75165 2243 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 PIGBOS1A0A0B4J2F0 54 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 A0A0G2JK05 382 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 HMX2A2RU54 273 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 RPL36A-HNRNPH2H7BZ11 118 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 SNAP29O95721 258 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF682O95780 498 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 B3GALT4O96024 378 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 PROCP04070 461 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 FAM157BP0CG42 384 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 HKR1P10072 659 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 GAAP10253 952 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 FCGR1AP12314 374 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 MUC1P15941 1255 aaPredicted RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 NDUFB7P17568 137 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 FPR3P25089 353 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 STOMP27105 288 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 CRYBB2P43320 205 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 CLDN20P56880 219 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 LSM6P62312 80 aaKnown RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 ESRRGP62508 458 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 EPS8Q12929 822 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 BNIP1Q12981 228 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 MED22Q15528 200 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 FAM98BQ52LJ0 330 aaKnown RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 PRR31Q5SQ13 230 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 C6orf141Q5SZD1 244 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 BEND6Q5SZJ8 279 aaPredicted RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 KANK2Q63ZY3 851 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 OLFML2AQ68BL7 652 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 TMEM65Q6PI78 240 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 ZCCHC23Q6ZST2 131 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 DOK3Q7L591 496 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 TRAPPC6BQ86SZ2 158 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 IGFN1Q86VF2 1251 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF573Q86YE8 665 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 CPNE8Q86YQ8 564 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 PGAM4Q8N0Y7 254 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 WDSUB1Q8N9V3 476 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 SLC16A11Q8NCK7 471 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 PROKR2Q8NFJ6 384 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 OR2Z1Q8NG97 314 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 NARS2Q96I59 477 aaKnown RBP2.48□□□□□ -2.01
CLOCK-209ENST00000511124 OR4C12Q96R67 309 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 MDFIQ99750 246 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 COQ7Q99807 217 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 AIFM2Q9BRQ8 373 aa2.48□□□□□ -2.01
CLOCK-209ENST00000511124 TMEM204Q9BSN7 226 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms