RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 PAX8Q06710 450 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 TGM3Q08188 693 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 RASGEF1BQ0VAM2 473 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 ZP4Q12836 540 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 EXOSC7Q15024 291 aaKnown RBP4.97□□□□□ -1.61
USP53-206ENST00000510737 C18orf21Q32NC0 220 aaPredicted RBP4.97□□□□□ -1.61
USP53-206ENST00000510737 GLYR1Q49A26 553 aaPredicted RBP4.97□□□□□ -1.61
USP53-206ENST00000510737 LGSNQ5TDP6 509 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 GKAP1Q5VSY0 366 aaPredicted RBP4.97□□□□□ -1.61
USP53-206ENST00000510737 OLFML2AQ68BL7 652 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 OR4C11Q6IEV9 310 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 SSX8Q7RTT4 187 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 SPATA19Q7Z5L4 167 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 GBP7Q8N8V2 638 aaPredicted RBP4.97□□□□□ -1.61
USP53-206ENST00000510737 WDR31Q8NA23 367 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 RNF128Q8TEB7 428 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 NAP1L3Q99457 506 aaPredicted RBP4.97□□□□□ -1.61
USP53-206ENST00000510737 ROGDIQ9GZN7 287 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 PLK3Q9H4B4 646 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 FN3KRPQ9HA64 309 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 BEX1Q9HBH7 125 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 LYARQ9NX58 379 aaKnown RBP4.97□□□□□ -1.61
USP53-206ENST00000510737 MS4A12Q9NXJ0 267 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 PAQR5Q9NXK6 330 aaPredicted RBP4.97□□□□□ -1.61
USP53-206ENST00000510737 RHCGQ9UBD6 479 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 ZNF69Q9UC07 566 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 ASB4Q9Y574 426 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 SOX21Q9Y651 276 aaPredicted RBP4.97□□□□□ -1.61
USP53-206ENST00000510737 A0A1B0GUS0 222 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 GOLGA6L10A6NI86 522 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 GOLGA6L19H0YKK7 550 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 ACOX3O15254 700 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 FADS1O60427 444 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 RAD51DO75771 328 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 APRTP07741 180 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 OR4A8P0C604 315 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 CD22P20273 847 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 COX5AP20674 150 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 PSMA4P25789 261 aaKnown RBP4.96□□□□□ -1.62
USP53-206ENST00000510737 HPDP32754 393 aaPredicted RBP4.96□□□□□ -1.62
USP53-206ENST00000510737 PPOXP50336 477 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 CCR9P51686 369 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 CARD18P57730 90 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 UBE2HP62256 183 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 CX3CL1P78423 397 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 MYBPC1Q00872 1141 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 GANABQ14697 944 aaKnown RBP4.96□□□□□ -1.62
USP53-206ENST00000510737 ELFN2Q5R3F8 820 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 SAXO2Q658L1 398 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 HBMQ6B0K9 141 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 C16orf87Q6PH81 154 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 BTN2A1Q7KYR7 527 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 KIRREL3Q8IZU9 778 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 RNF10Q8N5U6 811 aaKnown RBP4.96□□□□□ -1.62
USP53-206ENST00000510737 OR2V1Q8NHB1 315 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 MIPOL1Q8TD10 442 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 RBMXL1Q96E39 390 aaKnown RBP4.96□□□□□ -1.62
USP53-206ENST00000510737 MUS81Q96NY9 551 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 DOK1Q99704 481 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 MS4A8Q9BY19 250 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 IL22Q9GZX6 179 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 CCDC68Q9H2F9 335 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 TSPY26PQ9H489 355 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 EHD1Q9H4M9 534 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 BCAP29Q9UHQ4 241 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 ZNF639Q9UID6 485 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 TRMT6Q9UJA5 497 aaKnown RBP4.96□□□□□ -1.62
USP53-206ENST00000510737 EXPH5Q8NEV8 1989 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 PLCE1Q9P212 2302 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 CSMD3Q7Z407 3707 aa4.96□□□□□ -1.62
USP53-206ENST00000510737 A0A0G2JMP0 313 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 A0A0X1KG70 313 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 TMEM129A0AVI4 362 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 CLPSL1A2RUU4 121 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 C15orf61A6NNL5 157 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 J3QLI3 93 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 RTL8CO15255 209 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 SCO2O43819 266 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 GMFGO60234 142 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 ZNF189O75820 626 aaPredicted RBP4.95□□□□□ -1.62
USP53-206ENST00000510737 MPZL1O95297 269 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 CT45A8P0DMV1 189 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 CT45A9P0DMV2 189 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 NT5EP21589 574 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 CA6P23280 308 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 FDFT1P37268 417 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 CASP2P42575 452 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 SSR2P43308 183 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 RGS4P49798 205 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 EMDP50402 254 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 XKP51811 444 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 CDKN2DP55273 166 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 PAX9P55771 341 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 RAG2P55895 527 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 STX5Q13190 355 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 TAF13Q15543 124 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 GABRA6Q16445 453 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 TRMT12Q53H54 448 aaKnown RBP4.95□□□□□ -1.62
USP53-206ENST00000510737 CT45A2Q5DJT8 189 aa4.95□□□□□ -1.62
USP53-206ENST00000510737 KLF17Q5JT82 389 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms