RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 A0A1W2PRV1 198 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 FAM183AA6NL82 134 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 C21orf58P58505 322 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 PLCXD3Q63HM9 321 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 LILRB1Q8NHL6 650 aaPredicted RBP7.72□□□□□ -1.17
HTT-208ENST00000510626 RPUSD4Q96CM3 377 aaKnown RBP7.72□□□□□ -1.17
HTT-208ENST00000510626 OR5H8P0DN80 308 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 TRHRP34981 398 aaPredicted RBP7.72□□□□□ -1.17
HTT-208ENST00000510626 FOXA1P55317 472 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 PLGLAQ15195 96 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 PLEKHF2Q9H8W4 249 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 ACOXLQ9NUZ1 547 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 CSAG2Q9Y5P2 127 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 RICTORQ6R327 1708 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 APOA2P02652 100 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 ASCL1P50553 236 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 KIAA1024LP59773 190 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 AKR1C1Q04828 323 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 PGBD5Q8N414 524 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 SUMF1Q8NBK3 374 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 SFXN1Q9H9B4 322 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 A0A1B0GUL6 1792 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 COX5AP20674 150 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 RAB38P57729 211 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 GLDNQ6ZMI3 551 aaPredicted RBP7.71□□□□□ -1.17
HTT-208ENST00000510626 ARV1Q9H2C2 271 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 SDK2Q58EX2 2172 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 CSN1S1P47710 185 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 RPS18P62269 152 aaKnown RBP7.71□□□□□ -1.17
HTT-208ENST00000510626 OR2T2Q6IF00 324 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 MEX3BQ6ZN04 569 aaKnown RBP7.71□□□□□ -1.17
HTT-208ENST00000510626 OR51S1Q8NGJ8 323 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 TMPRSS13Q9BYE2 586 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 SORBS2O94875 1100 aaKnown RBP7.71□□□□□ -1.17
HTT-208ENST00000510626 GP1BAP07359 652 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 TMEM201Q5SNT2 666 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 MRPL2Q5T653 305 aaKnown RBP7.71□□□□□ -1.17
HTT-208ENST00000510626 EXD3Q8N9H8 876 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 HMGB4Q8WW32 186 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 TCTN2Q96GX1 697 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 ZIC5Q96T25 663 aa7.71□□□□□ -1.17
HTT-208ENST00000510626 ALX4Q9H161 411 aaPredicted RBP7.71□□□□□ -1.17
HTT-208ENST00000510626 GJC3Q8NFK1 279 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 VN1R3Q9BXE9 311 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 KIAA2026Q5HYC2 2103 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 OR6C68A6NDL8 312 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 ZAR1LA6NP61 321 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 XRCC3O43542 346 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 ORM1P02763 201 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 SLC11A1P49279 550 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 EEF1A1P68104 462 aaKnown RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 SMN1Q16637 294 aaKnown RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 EEF1A1P5Q5VTE0 462 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 HSD17B11Q8NBQ5 300 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 OR51A4Q8NGJ6 313 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 ALKBH4Q9NXW9 302 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 GAB2Q9UQC2 676 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 ATXN1LP0C7T5 689 aaKnown RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 STAG3L3P0CL85 134 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 PGA3P0DJD8 388 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 TBPL2Q6SJ96 375 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 SLC35A4Q96G79 324 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 LRFN3Q9BTN0 628 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 CHST6Q9GZX3 395 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 DNMT3BQ9UBC3 853 aaKnown RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 MBPP02686 304 aaPredicted RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 CD37P11049 281 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 NID1P14543 1247 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 GABREP78334 506 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 SDSLQ96GA7 329 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 SLIRPQ9GZT3 109 aaKnown RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 PLK3Q9H4B4 646 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 DLL4Q9NR61 685 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 CTDSPLO15194 276 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 SIX6O95475 246 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 SLC35E2P0CK97 266 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 BLVRBP30043 206 aaPredicted RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 GCH1P30793 250 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 CCL23P55773 120 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 FXNQ16595 210 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 TMPRSS11FQ6ZWK6 438 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 APCDD1Q8J025 514 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 BSCL2Q96G97 398 aaPredicted RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 OTOL1A6NHN0 477 aaPredicted RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 C17orf107Q6ZR85 190 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 RIMKLAQ8IXN7 391 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 MMP21Q8N119 569 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 LRRC15Q8TF66 581 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 INTS12Q96CB8 462 aaKnown RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 PDXPQ96GD0 296 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 OR5B2Q96R09 309 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 CDCA3Q99618 268 aaPredicted RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 CHST8Q9H2A9 424 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 ACAD8Q9UKU7 415 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 SCN5AQ14524 2016 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 ACACAQ13085 2346 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 DDNO94850 711 aaPredicted RBP7.71□□□□□ -1.18
HTT-208ENST00000510626 SLC16A14Q7RTX9 510 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 GABRG1Q8N1C3 465 aa7.71□□□□□ -1.18
HTT-208ENST00000510626 EGLN2Q96KS0 407 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms