RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 MSR1P21757 451 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 CTSSP25774 331 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 CEACAM8P31997 349 aaPredicted RBP15.38■□□□□ 0.05
RNF4-209ENST00000507784 ARF1P84077 181 aaKnown RBP15.38■□□□□ 0.05
RNF4-209ENST00000507784 ZNF85Q03923 595 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 IRF3Q14653 427 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 TMEM211Q6ICI0 200 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 TFAP2EQ6VUC0 442 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 NCCRP1Q6ZVX7 275 aaPredicted RBP15.38■□□□□ 0.05
RNF4-209ENST00000507784 ATCAYQ86WG3 371 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 CDC20BQ86Y33 519 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 LRRC18Q8N456 261 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 KLHL36Q8N4N3 616 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 NAXEQ8NCW5 288 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 OR2AJ1Q8NGZ0 328 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 SIGLEC11Q96RL6 698 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 MNTQ99583 582 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 ALG8Q9BVK2 526 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 NELFAQ9H3P2 528 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 ACOT13Q9NPJ3 140 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 INPP5EQ9NRR6 644 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 TMEM38BQ9NVV0 291 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 KCNG2Q9UJ96 466 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 TMEM14AQ9Y6G1 99 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 PKD1L2Q7Z442 2459 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 SHANK1Q9Y566 2161 aa15.38■□□□□ 0.05
RNF4-209ENST00000507784 HSPB2A8KAH6 182 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 RPL36A-HNRNPH2H7BZ11 118 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 TNFSF13O75888 250 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 PTHP01270 115 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 HRGP04196 525 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 LIMS3P0CW19 117 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 LIMS4P0CW20 117 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 NPR2P20594 1047 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 FOXG1P55316 489 aaPredicted RBP15.37■□□□□ 0.05
RNF4-209ENST00000507784 MRPL49Q13405 166 aaKnown RBP15.37■□□□□ 0.05
RNF4-209ENST00000507784 GALEQ14376 348 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 MED22Q15528 200 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 HSPB2Q16082 182 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 KCNMB1Q16558 191 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 RNLSQ5VYX0 342 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 SLC18B1Q6NT16 456 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 TMPRSS11AQ6ZMR5 421 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 ZNF813Q6ZN06 617 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 FOXL2NBQ6ZUU3 175 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 SSX6Q7RTT6 188 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 RFLNBQ8N5W9 214 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 NANOGP1Q8N7R0 232 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 ZNF610Q8N9Z0 462 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 SNX33Q8WV41 574 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 RORBQ92753 470 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 STARD4Q96DR4 205 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 MRPL48Q96GC5 212 aaKnown RBP15.37■□□□□ 0.05
RNF4-209ENST00000507784 MND1Q9BWT6 205 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 JAM3Q9BX67 310 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 OPN3Q9H1Y3 402 aaPredicted RBP15.37■□□□□ 0.05
RNF4-209ENST00000507784 PLSCR4Q9NRQ2 329 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 KLHDC2Q9Y2U9 406 aa15.37■□□□□ 0.05
RNF4-209ENST00000507784 TPRP12270 2363 aaKnown RBP15.37■□□□□ 0.05
RNF4-209ENST00000507784 FREM1Q5H8C1 2179 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 TRIM64CA6NLI5 447 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 ZNF99A8MXY4 864 aaPredicted RBP15.36■□□□□ 0.05
RNF4-209ENST00000507784 J3QLW9 94 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 PHYHO14832 338 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 LCKP06239 509 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 PSKH1P11801 424 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 B4GALT1P15291 398 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 ZNF19P17023 458 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 PCMT1P22061 227 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 CD79BP40259 229 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 NR1H2P55055 460 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 MRPS34P82930 218 aaKnown RBP15.36■□□□□ 0.05
RNF4-209ENST00000507784 TBCEQ15813 527 aaPredicted RBP15.36■□□□□ 0.05
RNF4-209ENST00000507784 STK11Q15831 433 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 TEX30Q5JUR7 227 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 OR2G6Q5TZ20 316 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 CORO6Q6QEF8 472 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 KLHL24Q6TFL4 600 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 SPATC1Q76KD6 591 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 ZNF454Q8N9F8 522 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 OTOSQ8NHW6 89 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 SPRYD4Q8WW59 207 aaPredicted RBP15.36■□□□□ 0.05
RNF4-209ENST00000507784 GATAD2BQ8WXI9 593 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 NABP1Q96AH0 204 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 MYCBPQ99417 103 aaPredicted RBP15.36■□□□□ 0.05
RNF4-209ENST00000507784 SH3GL3Q99963 347 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 ZNF416Q9BWM5 594 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 SFXN3Q9BWM7 321 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 KCNN2Q9H2S1 579 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 SIAEQ9HAT2 523 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 IKZF2Q9UKS7 526 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 MEMO1Q9Y316 297 aa15.36■□□□□ 0.05
RNF4-209ENST00000507784 A0A0G2JNJ9 132 aa15.35■□□□□ 0.05
RNF4-209ENST00000507784 E9PLN8 166 aa15.35■□□□□ 0.05
RNF4-209ENST00000507784 PSMD9O00233 223 aa15.35■□□□□ 0.05
RNF4-209ENST00000507784 CCL21O00585 134 aa15.35■□□□□ 0.05
RNF4-209ENST00000507784 MAGEB4O15481 346 aaPredicted RBP15.35■□□□□ 0.05
RNF4-209ENST00000507784 FARS2O95363 451 aaKnown RBP15.35■□□□□ 0.05
RNF4-209ENST00000507784 HSMCR30P0CW71 290 aa15.35■□□□□ 0.05
RNF4-209ENST00000507784 OR8G3PP0DMU2 310 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms