RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 KRT14P02533 472 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 PRB2P02812 416 aaPredicted RBP2.1□□□□□ -2.07
LSM6-205ENST00000507449 RETP07949 1114 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 ACSM4P0C7M7 580 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 PRPS2P11908 318 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 MAGP20916 626 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 DCKP27707 260 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 OTX1P32242 354 aaPredicted RBP2.1□□□□□ -2.07
LSM6-205ENST00000507449 FOXN2P32314 431 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 CDKN2BP42772 138 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 RAB10P61026 200 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 RPS15P62841 145 aaKnown RBP2.1□□□□□ -2.07
LSM6-205ENST00000507449 LRRC63Q05C16 580 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 RCN1Q15293 331 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 DEFB116Q30KQ4 102 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 HES5Q5TA89 166 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 C9orf135Q5VTT2 229 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 ANKRD22Q5VYY1 191 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 C22orf42Q6IC83 251 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 CEMP1Q6PRD7 247 aaPredicted RBP2.1□□□□□ -2.07
LSM6-205ENST00000507449 SLC16A14Q7RTX9 510 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 HDDC2Q7Z4H3 204 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 SCD5Q86SK9 330 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 LINC01551Q86U37 167 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 IQCKQ8N0W5 287 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 OR4C5Q8NGB2 326 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 OR4A4PQ8NGN8 299 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 LKAAEAR1Q8TD35 194 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 STARD8Q92502 1023 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 COL21A1Q96P44 957 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 CHP1Q99653 195 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 C20orf24Q9BUV8 137 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 LINC00597Q9H2U6 94 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 NOX3Q9HBY0 568 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 MYOZ2Q9NPC6 264 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 RAB20Q9NX57 234 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 PTTG3PQ9NZH4 202 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 GOLT1BQ9Y3E0 138 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 A0A075B6Q4 140 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 IGLV1-36A0A0B4J1U3 117 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 TRBV9A0A0B4J1U6 114 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 INS-IGF2F8WCM5 200 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 SIRPB1O00241 398 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 LSM1O15116 133 aaKnown RBP2.09□□□□□ -2.07
LSM6-205ENST00000507449 EIF4E2O60573 245 aaKnown RBP2.09□□□□□ -2.07
LSM6-205ENST00000507449 KLHL41O60662 606 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 CDH16O75309 829 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 FABP3P05413 133 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 CALM1P0DP23 149 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 CALM2P0DP24 149 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 CALM3P0DP25 149 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 ZNF32P17041 273 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 SLC1A1P43005 524 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 RPS9P46781 194 aaKnown RBP2.09□□□□□ -2.07
LSM6-205ENST00000507449 ADARB1P78563 741 aaKnown RBP2.09□□□□□ -2.07
LSM6-205ENST00000507449 LIPEQ05469 1076 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 TWF1Q12792 350 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 MAB21L1Q13394 359 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 ILKQ13418 452 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 PTGES3Q15185 160 aaKnown RBP2.09□□□□□ -2.07
LSM6-205ENST00000507449 TFDP3Q5H9I0 405 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 ZNF691Q5VV52 312 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 FBXW12Q6X9E4 464 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 FAM92BQ6ZTR7 304 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 OAFQ86UD1 273 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 CMTM1Q8IZ96 169 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 OR10G2Q8NGC3 310 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 OR10G4Q8NGN3 311 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 CAPSLQ8WWF8 208 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 CREB3L1Q96BA8 519 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 BMFQ96LC9 184 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 OR2A5Q96R48 311 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 IFI27L2Q9H2X8 130 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 RPP21Q9H633 154 aaKnown RBP2.09□□□□□ -2.07
LSM6-205ENST00000507449 GEMIN7Q9H840 131 aaKnown RBP2.09□□□□□ -2.07
LSM6-205ENST00000507449 TMEM165Q9HC07 324 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 MTCH1Q9NZJ7 389 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 PSG11Q9UQ72 335 aa2.09□□□□□ -2.07
LSM6-205ENST00000507449 INSRP06213 1382 aa2.09□□□□□ -2.08
LSM6-205ENST00000507449 IGHV3-74A0A0B4J1X5 117 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 IGHV5-51A0A0C4DH38 117 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 K7EMT4 169 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 NUPL2O15504 423 aaKnown RBP2.08□□□□□ -2.08
LSM6-205ENST00000507449 RP2O75695 350 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 RAB3DO95716 219 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 SERPINE2P07093 398 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 OR5H8P0DN80 308 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 RRM2P31350 389 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 SYKP43405 635 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 CYB561P49447 251 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 MNAT1P51948 309 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 HERVK_113P61574 105 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 PON2Q15165 354 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 OR7A5Q15622 319 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 FAM83EQ2M2I3 478 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 PTPN20Q4JDL3 420 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 SPANXN2Q5MJ10 180 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 CCNJQ5T5M9 372 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms