RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 CLDN22Q8N7P3 220 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 SLC25A40Q8TBP6 338 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 C10orf82Q8WW14 230 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 IPCEF1Q8WWN9 437 aaPredicted RBP9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 RAB39BQ96DA2 213 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 TPD52L3Q96J77 140 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 ZNF583Q96ND8 569 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 ALG12Q9BV10 488 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 TXNIPQ9H3M7 391 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 G6PC2Q9NQR9 355 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 EIF3KQ9UBQ5 218 aaKnown RBP9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 HIF3AQ9Y2N7 669 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 WIPI2Q9Y4P8 454 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 DYSFO75923 2080 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 LOC105371242A0A075B767 164 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 ZSCAN5BA6NJL1 495 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 PLPP2O43688 288 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 DEAF1O75398 565 aaPredicted RBP9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 AVPP01185 164 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 IGHV2-5P01817 119 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 IGHMP01871 453 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 NR2C1P13056 603 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 ANPEPP15144 967 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 EPHA1P21709 976 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 KDELR2P33947 212 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 MMP15P51511 669 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 RPL27P61353 136 aaKnown RBP9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 PSG4Q00888 419 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 ST3GAL3Q11203 375 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 SF3A3Q12874 501 aaKnown RBP eCLIP9.81□□□□□ -0.845e-6■□□□□ 8
HMGCS1-204ENST00000507293 TAF11Q15544 211 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 MAPRE2Q15555 327 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 HFEQ30201 348 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 THEM4Q5T1C6 240 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 ZNF771Q7L3S4 317 aaPredicted RBP9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 MICU2Q8IYU8 434 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 ZNF418Q8TF45 676 aaPredicted RBP9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 ZFAND2BQ8WV99 257 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 BPIFA2Q96DR5 249 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 ELMOD3Q96FG2 381 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 MARS2Q96GW9 593 aaKnown RBP9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 TIMD4Q96H15 378 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 PRRC1Q96M27 445 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 OR2H1Q9GZK4 316 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 OR2J1Q9GZK6 312 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 WNT5BQ9H1J7 359 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 VIPAS39Q9H9C1 493 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 A4GNTQ9UNA3 340 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 SVEP1Q4LDE5 3571 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 ARHGAP32A7KAX9 2087 aa9.81□□□□□ -0.84
HMGCS1-204ENST00000507293 TRAV27A0A087WT01 109 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 A0A0G2JMP0 313 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 A0A0X1KG70 313 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 A0A1W2PPL8 197 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 PLSCR5A0PG75 271 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 NPPAP01160 153 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 TROVE2P10155 538 aaKnown RBP eCLIP9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 FUT4P22083 530 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 LAP3P28838 519 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 YAP1P46937 504 aaKnown RBP9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 ARFIP2P53365 341 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 CTXN1P60606 82 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 PPP1CBP62140 327 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 ACTG1P63261 375 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 FAM209AQ5JX71 171 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 FAM27BQ5VT28 67 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 MBNL2Q5VZF2 373 aaKnown RBP9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 UNQ6126/PRO20091Q6UXV3 157 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 FOXL2NBQ6ZUU3 175 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 TEX29Q8N6K0 151 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 LRRC75AQ8NAA5 344 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 OR2T12Q8NG77 320 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 OR4M2Q8NGB6 313 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 ABHD4Q8TB40 342 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 KLF14Q8TD94 323 aaPredicted RBP9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 RAB1CQ92928 201 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 RBP7Q96R05 134 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 TMPRSS13Q9BYE2 586 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 SAR1AQ9NR31 198 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 RHCGQ9UBD6 479 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 PCDHB10Q9UN67 800 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 WNK2Q9Y3S1 2297 aa9.8□□□□□ -0.84
HMGCS1-204ENST00000507293 LOC100653049A0A140TA62 436 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 ISPDA4D126 451 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 KRT34O76011 436 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 NGFP01138 241 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 CST2P09228 141 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 CFPP27918 469 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 IFNA8P32881 189 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 HILS1P60008 231 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 SELENOWP63302 87 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 HNRNPA0Q13151 305 aaKnown RBP9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 ENDOGQ14249 297 aaKnown RBP9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 DCAF12L2Q5VW00 463 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 FAM205BPQ63HN1 556 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 CGB2Q6NT52 195 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 ZNF774Q6NX45 483 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 C1QL2Q7Z5L3 287 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 NRMQ8IXM6 262 aa9.79□□□□□ -0.84
HMGCS1-204ENST00000507293 OFCC1Q8IZS5 231 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms