RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 ZNF544Q6NX49 715 aa11.36□□□□□ -0.59
TCOF1-209ENST00000506630 ZNF620Q6ZNG0 422 aa11.36□□□□□ -0.59
TCOF1-209ENST00000506630 DTX2Q86UW9 622 aa11.36□□□□□ -0.59
TCOF1-209ENST00000506630 JAZF1Q86VZ6 243 aa11.36□□□□□ -0.59
TCOF1-209ENST00000506630 PHC2Q8IXK0 858 aa11.36□□□□□ -0.59
TCOF1-209ENST00000506630 AQP11Q8NBQ7 271 aa11.36□□□□□ -0.59
TCOF1-209ENST00000506630 OR52L1Q8NGH7 329 aa11.36□□□□□ -0.59
TCOF1-209ENST00000506630 SAMD8Q96LT4 415 aa11.36□□□□□ -0.59
TCOF1-209ENST00000506630 ERMAPQ96PL5 475 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-209ENST00000506630 EGLN3Q9H6Z9 239 aa11.36□□□□□ -0.59
TCOF1-209ENST00000506630 SIAEQ9HAT2 523 aa11.36□□□□□ -0.59
TCOF1-209ENST00000506630 FBXL3Q9UKT7 428 aa11.36□□□□□ -0.59
TCOF1-209ENST00000506630 TCRBV3S1A0A5B6 114 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 GASTP01350 101 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 CD8AP01732 235 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 HOXB6P17509 224 aaKnown RBP11.35□□□□□ -0.59
TCOF1-209ENST00000506630 NOS3P29474 1203 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 APOBEC3AP31941 199 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-209ENST00000506630 CBX1P83916 185 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 HSF2Q03933 536 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 SNTB2Q13425 540 aaKnown RBP11.35□□□□□ -0.59
TCOF1-209ENST00000506630 TNK1Q13470 666 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 ETFDHQ16134 617 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 MICAQ29983 383 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 ZNF770Q6IQ21 691 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-209ENST00000506630 KRT80Q6KB66 452 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 DPPA2Q7Z7J5 298 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 ADCK1Q86TW2 530 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 ZNF584Q8IVC4 421 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 IL17RDQ8NFM7 739 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 OR4F15Q8NGB8 312 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 OR10G2Q8NGC3 310 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 NABP1Q96AH0 204 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 TRMT61AQ96FX7 289 aaKnown RBP11.35□□□□□ -0.59
TCOF1-209ENST00000506630 ZNF75AQ96N20 296 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 FOXN4Q96NZ1 517 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 SYT4Q9H2B2 425 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 RERGLQ9H628 205 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 YY1AP1Q9H869 796 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 CCNB1IP1Q9NPC3 277 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 CBLN4Q9NTU7 201 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 ZNF701Q9NV72 531 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-209ENST00000506630 CDH10Q9Y6N8 788 aa11.35□□□□□ -0.59
TCOF1-209ENST00000506630 IMPA2O14732 288 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 AHCYL1O43865 530 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 MGRN1O60291 552 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 SLC16A7O60669 478 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 FKBP6O75344 327 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 E2F6O75461 281 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 TXNDC12O95881 172 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 APEHP13798 732 aaKnown RBP11.34□□□□□ -0.59
TCOF1-209ENST00000506630 CTLA4P16410 223 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 ZNF32P17041 273 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 MSR1P21757 451 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 GALK2Q01415 458 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 HGFACQ04756 655 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 PLP2Q04941 152 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 DAG1Q14118 895 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 GK3PQ14409 553 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 CLEC12AQ5QGZ9 265 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 C11orf71Q6IPW1 123 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 RPL13AP3Q6NVV1 102 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 LEG1Q6P5S2 330 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 CCDC121Q6ZUS5 278 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 PTCHD4Q6ZW05 846 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 SLC30A7Q8NEW0 376 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 NUP37Q8NFH4 326 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 FBXO17Q96EF6 278 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 CACNG6Q9BXT2 260 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 LRMDAQ9H2I8 198 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 CA10Q9NS85 328 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 TBC1D23Q9NUY8 699 aa11.34□□□□□ -0.59
TCOF1-209ENST00000506630 VSX1Q9NZR4 365 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-209ENST00000506630 IQCMA0A1B0GVH7 501 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 RNF223E7ERA6 249 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 OVOL3O00110 214 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 CIB2O75838 187 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 SOX14O95416 240 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 RENP00797 406 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 SERPINA5P05154 406 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 MMP7P09237 267 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-209ENST00000506630 HIST1H1CP16403 213 aaKnown RBP11.33□□□□□ -0.6
TCOF1-209ENST00000506630 LAP3P28838 519 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 CDKN2AP42771 156 aaKnown RBP11.33□□□□□ -0.6
TCOF1-209ENST00000506630 KRTAP1-1Q07627 177 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 CLEC12BQ2HXU8 276 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 TBC1D28Q2M2D7 210 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 SLC35F1Q5T1Q4 408 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 C1orf146Q5VVC0 180 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 DNM1P34Q6PK57 102 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 RASSF6Q6ZTQ3 369 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 FOXL2NBQ6ZUU3 175 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 OR4K13Q8NH42 304 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 GIPC3Q8TF64 312 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 DGCR6LQ9BY27 220 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 PLA2G12AQ9BZM1 189 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 NUAK2Q9H093 628 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 MMADHCQ9H3L0 296 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-209ENST00000506630 C1orf198Q9H425 327 aa11.33□□□□□ -0.6
TCOF1-209ENST00000506630 CDH20Q9HBT6 801 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms