RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 EMC7Q9NPA0 242 aa17.91■□□□□ 0.46
CDC42SE2-206ENST00000503291 MRPS18AQ9NVS2 196 aaKnown RBP17.91■□□□□ 0.46
CDC42SE2-206ENST00000503291 SCN3BQ9NY72 215 aa17.91■□□□□ 0.46
CDC42SE2-206ENST00000503291 PSORS1C1Q9UIG5 152 aa17.91■□□□□ 0.46
CDC42SE2-206ENST00000503291 COMMD3-BMI1R4GMX3 469 aa17.91■□□□□ 0.46
CDC42SE2-206ENST00000503291 PTGES3LE9PB15 166 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 PYCARD-AS1I3L0S3 204 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 SBK2P0C263 348 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 MSR1P21757 451 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 CRHBPP24387 322 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 NAA10P41227 235 aaPredicted RBP17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 SH3BGRP55822 239 aaPredicted RBP17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 TSC22D1Q15714 1073 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 KCNMB1Q16558 191 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 RBM48Q5RL73 367 aaKnown RBP17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 FAM27BQ5VT28 67 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 SHFQ7M4L6 423 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 LRRC18Q8N456 261 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 SLC22A24Q8N4F4 322 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 OR4F15Q8NGB8 312 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 SMAP2Q8WU79 429 aaPredicted RBP17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 LGALS12Q96DT0 336 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 INTS14Q96SY0 518 aa17.9■□□□□ 0.46
CDC42SE2-206ENST00000503291 A0A096LPE4 126 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 A0A1W2PPZ6 126 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 CIB4A0PJX0 185 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 ZNF593O00488 134 aaPredicted RBP17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 OR8G3PP0DMU2 310 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 ZNF823P16415 610 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 ADAM8P78325 824 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 POU4F2Q12837 409 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 NRN1LQ496H8 165 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 SFRP5Q5T4F7 317 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 KLHL24Q6TFL4 600 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 ZNF540Q8NDQ6 660 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 OR1K1Q8NGR3 316 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 CA5BP1Q8WTZ4 195 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 CNN2Q99439 309 aaKnown RBP17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 SH3GL3Q99963 347 aa17.89■□□□□ 0.46
CDC42SE2-206ENST00000503291 ZG16O60844 167 aa17.89■□□□□ 0.45
CDC42SE2-206ENST00000503291 RPS27P42677 84 aaKnown RBP17.89■□□□□ 0.45
CDC42SE2-206ENST00000503291 RAB40BQ12829 278 aa17.89■□□□□ 0.45
CDC42SE2-206ENST00000503291 SLC25A35Q3KQZ1 300 aa17.89■□□□□ 0.45
CDC42SE2-206ENST00000503291 KLHL22Q53GT1 634 aa17.89■□□□□ 0.45
CDC42SE2-206ENST00000503291 ANKRD16Q6P6B7 361 aa17.89■□□□□ 0.45
CDC42SE2-206ENST00000503291 OR10H5Q8NGA6 315 aa17.89■□□□□ 0.45
CDC42SE2-206ENST00000503291 OR6N2Q8NGY6 317 aa17.89■□□□□ 0.45
CDC42SE2-206ENST00000503291 ZNF416Q9BWM5 594 aa17.89■□□□□ 0.45
CDC42SE2-206ENST00000503291 TPRKBQ9Y3C4 175 aa17.89■□□□□ 0.45
CDC42SE2-206ENST00000503291 RAD51DO75771 328 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 ENTPD1P49961 510 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 HCCSP53701 268 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 LSM6P62312 80 aaKnown RBP17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 FAM27E3Q08E93 113 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 CDSNQ15517 529 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 GABRA6Q16445 453 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 STAC2Q6ZMT1 411 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 AHSA2Q719I0 299 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 SLC16A9Q7RTY1 509 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 SKA3Q8IX90 412 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 BCL2L2Q92843 193 aaPredicted RBP17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 CDADC1Q9BWV3 514 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 YTHDF1Q9BYJ9 559 aaKnown RBP17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 ELOVL5Q9NYP7 299 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 EXOGQ9Y2C4 368 aaKnown RBP17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 MYRFQ9Y2G1 1151 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 EFCAB10A6NFE3 127 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 CHN2P52757 468 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 ENDOGQ14249 297 aaKnown RBP17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 HIKESHIQ53FT3 197 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 DPY19L4Q7Z388 723 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 OR52I1Q8NGK6 324 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 FKBP14Q9NWM8 211 aa17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 PAK1IP1Q9NWT1 392 aaPredicted RBP17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 CNOT2Q9NZN8 540 aaKnown RBP17.88■□□□□ 0.45
CDC42SE2-206ENST00000503291 FAM90A27PA6NNH2 459 aa17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 FARS2O95363 451 aaKnown RBP17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 FADS2O95864 444 aaKnown RBP17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 SPARCP09486 303 aa17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 PSKH1P11801 424 aa17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 SLC35A2P78381 396 aa17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 ST3GAL4Q11206 333 aa17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 TEX30Q5JUR7 227 aa17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 SGCDQ92629 289 aa17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 DUSP21Q9H596 190 aa17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 GALNT8Q9NY28 637 aa17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 CYB5R1Q9UHQ9 305 aa17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 BLOC1S6Q9UL45 172 aa17.87■□□□□ 0.45
CDC42SE2-206ENST00000503291 J3QRE1 110 aa17.86■□□□□ 0.45
CDC42SE2-206ENST00000503291 PIPP12273 146 aaPredicted RBP17.86■□□□□ 0.45
CDC42SE2-206ENST00000503291 PSMB1P20618 241 aaKnown RBP17.86■□□□□ 0.45
CDC42SE2-206ENST00000503291 CD79BP40259 229 aa17.86■□□□□ 0.45
CDC42SE2-206ENST00000503291 MVKQ03426 396 aa17.86■□□□□ 0.45
CDC42SE2-206ENST00000503291 PCK2Q16822 640 aa17.86■□□□□ 0.45
CDC42SE2-206ENST00000503291 TBRG1Q3YBR2 411 aa17.86■□□□□ 0.45
CDC42SE2-206ENST00000503291 OR7E24Q6IFN5 339 aa17.86■□□□□ 0.45
CDC42SE2-206ENST00000503291 XKRXQ6PP77 449 aa17.86■□□□□ 0.45
CDC42SE2-206ENST00000503291 BHLHA15Q7RTS1 189 aaPredicted RBP17.86■□□□□ 0.45
CDC42SE2-206ENST00000503291 LINC00346Q8IVM7 164 aa17.86■□□□□ 0.45
CDC42SE2-206ENST00000503291 C1orf162Q8NEQ5 155 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms