RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 NARS2Q96I59 477 aaKnown RBP4.63□□□□□ -1.67
HTT-202ENST00000502820 ART5Q96L15 291 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 LINC00052Q96N35 136 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 WFIKKN1Q96NZ8 548 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 HS3ST6Q96QI5 342 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 OR2A7Q96R45 310 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 ATF6BQ99941 703 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 EGFL8Q99944 293 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 FAM173AQ9BQD7 235 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 INPP5KQ9BT40 448 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 THAP7Q9BT49 309 aaPredicted RBP4.63□□□□□ -1.67
HTT-202ENST00000502820 TSSK6Q9BXA6 273 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 BHLHE41Q9C0J9 482 aaPredicted RBP4.63□□□□□ -1.67
HTT-202ENST00000502820 OR51M1Q9H341 326 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 KLHL31Q9H511 634 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 ANKRD19PQ9H560 264 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 OPA3Q9H6K4 179 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 TPT1P8Q9HAU6 139 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 BRF2Q9HAW0 419 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 CACYBPQ9HB71 228 aaKnown RBP4.63□□□□□ -1.67
HTT-202ENST00000502820 GALNT9Q9HCQ5 603 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 BRD7Q9NPI1 651 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 NUDT15Q9NV35 164 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 SIRT5Q9NXA8 310 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 BABAM2Q9NXR7 383 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 WWOXQ9NZC7 414 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 ABRACLQ9P1F3 81 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 MYEF2Q9P2K5 600 aaKnown RBP4.63□□□□□ -1.67
HTT-202ENST00000502820 TESQ9UGI8 421 aaKnown RBP4.63□□□□□ -1.67
HTT-202ENST00000502820 UTS2RQ9UKP6 389 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 DYRK1BQ9Y463 629 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 CLDN16Q9Y5I7 305 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 WIF1Q9Y5W5 379 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 CLCA3PQ9Y6N3 262 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 CNTRLQ7Z7A1 2325 aa4.63□□□□□ -1.67
HTT-202ENST00000502820 INTS1Q8N201 2190 aaKnown RBP4.63□□□□□ -1.67
HTT-202ENST00000502820 NUP210LQ5VU65 1888 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 HCFC1P51610 2035 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 CCDC88CQ9P219 2028 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 CIB4A0PJX0 185 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 TMEM218A2RU14 115 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 NCF1BA6NI72 391 aaPredicted RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 NCF1CA8MVU1 366 aaPredicted RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 TGFBR3LH3BV60 316 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 DNASE2O00115 360 aaPredicted RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 CYR61O00622 381 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 SSNA1O43805 119 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 SUSD5O60279 629 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 CREBL2O60519 120 aaPredicted RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 CLEC3AO75596 197 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 STK16O75716 305 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 SCO1O75880 301 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 RGS9O75916 674 aaPredicted RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 KRT33AO76009 404 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 LRATO95237 230 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 GOSR1O95249 250 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 MPC2O95563 127 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 SERPINA3P01011 423 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 CD1AP06126 327 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 IL3P08700 152 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 RNH1P13489 461 aaKnown RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 MGMTP16455 207 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 SDC1P18827 310 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 PVALBP20472 110 aaPredicted RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 GDF1P27539 372 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 APEX1P27695 318 aaKnown RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 HTR2AP28223 471 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 EPHA2P29317 976 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 TRHRP34981 398 aaPredicted RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 RBMXP38159 391 aaKnown RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 PMELP40967 661 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 SOX3P41225 446 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 HTR6P50406 440 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 RNF144AP50876 292 aaPredicted RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 CASP9P55211 416 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 CDH12P55289 794 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 PCBP3P57721 371 aaKnown RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 RAB8AP61006 207 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 STXBP1P61764 594 aaKnown RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 BTG2P78543 158 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 SRYQ05066 204 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 FAM27E3Q08E93 113 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 FOXF2Q12947 444 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 RUNX2Q13950 521 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 SLBPQ14493 270 aaKnown RBP eCLIP4.62□□□□□ -1.67
HTT-202ENST00000502820 RGNQ15493 299 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 SWI5Q1ZZU3 235 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 EXOC3L2Q2M3D2 409 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 HYAL4Q2M3T9 481 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 HFEQ30201 348 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 ACSF3Q4G176 576 aaPredicted RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 FBXO48Q5FWF7 155 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 XKR6Q5GH73 641 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 AVPI1Q5T686 147 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 PRAMEF20Q5VT98 475 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 LIPKQ5VXJ0 399 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 LIPJQ5W064 366 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 HIST2H2AA3Q6FI13 130 aa4.62□□□□□ -1.67
HTT-202ENST00000502820 DHRS7BQ6IAN0 325 aaPredicted RBP4.62□□□□□ -1.67
HTT-202ENST00000502820 C22orf42Q6IC83 251 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms