RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 DHRSXQ8N5I4 330 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 FGFBP3Q8TAT2 258 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 NANOS1Q8WY41 292 aaKnown RBP10.4□□□□□ -0.74
CUX1-210ENST00000497815 C11orf40Q8WZ69 217 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 PITX2Q99697 317 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 ADI1Q9BV57 179 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 KCNN2Q9H2S1 579 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 RNF121Q9H920 327 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 NOX3Q9HBY0 568 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 RASSF1Q9NS23 344 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 AASSQ9UDR5 926 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 POLR1DQ9Y2S0 133 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 SLC25A15Q9Y619 301 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 GCN1Q92616 2671 aaKnown RBP10.4□□□□□ -0.75
CUX1-210ENST00000497815 FREM1Q5H8C1 2179 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 PCNX1Q96RV3 2341 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 ARPC4-TTLL3A0A0A6YYG9 625 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 E9PQ18 207 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 M0R1B8 84 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 SLC16A6O15403 523 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 WNT11O96014 354 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 TFP02787 698 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 GAAP10253 952 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 COX6B1P14854 86 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 FMO3P31513 532 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 PEX19P40855 299 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 EFNB1P98172 346 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 IL5RAQ01344 420 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 TEKQ02763 1124 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 HSF2Q03933 536 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 KEAP1Q14145 624 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 ENDOGQ14249 297 aaKnown RBP10.39□□□□□ -0.75
CUX1-210ENST00000497815 SLC36A2Q495M3 483 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 NRN1LQ496H8 165 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 C6orf52Q5T4I8 152 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 FAM27BQ5VT28 67 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 HIST2H2BCQ6DN03 193 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 IZUMO2Q6UXV1 221 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 MDP1Q86V88 176 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 DEPDC4Q8N2C3 294 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 ZNF511Q8NB15 262 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 SLC26A10Q8NG04 563 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 OR10H5Q8NGA6 315 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 OR8J1Q8NGP2 316 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 ZMYND19Q96E35 227 aaPredicted RBP10.39□□□□□ -0.75
CUX1-210ENST00000497815 FBXO17Q96EF6 278 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 DACH2Q96NX9 599 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 SPOCK3Q9BQ16 436 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 USB1Q9BQ65 265 aaKnown RBP10.39□□□□□ -0.75
CUX1-210ENST00000497815 ZNF416Q9BWM5 594 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 CCNB1IP1Q9NPC3 277 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 ZNF226Q9NYT6 803 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 ZNF224Q9NZL3 707 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 NPAP1Q9NZP6 1156 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 DNAJC27Q9NZQ0 273 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 H2AFY2Q9P0M6 372 aaPredicted RBP10.39□□□□□ -0.75
CUX1-210ENST00000497815 HCFC1P51610 2035 aa10.39□□□□□ -0.75
CUX1-210ENST00000497815 USP9XQ93008 2570 aaPredicted RBP10.39□□□□□ -0.75
CUX1-210ENST00000497815 C12orf71A8MTZ7 269 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 PRODHO43272 600 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 GLCEO94923 617 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 UBL3O95164 117 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 RAB36O95755 333 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 MRPL3P09001 348 aaKnown RBP10.38□□□□□ -0.75
CUX1-210ENST00000497815 CST2P09228 141 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 EPXP11678 715 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
CUX1-210ENST00000497815 ZNF823P16415 610 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 ZNF32P17041 273 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 SLC2A5P22732 501 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 GSTT1P30711 240 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 CAPGP40121 348 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 VHLP40337 213 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 RPS27P42677 84 aaKnown RBP10.38□□□□□ -0.75
CUX1-210ENST00000497815 RAB1AP62820 205 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 ADAM8P78325 824 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 ADARB1P78563 741 aaKnown RBP10.38□□□□□ -0.75
CUX1-210ENST00000497815 SNCBQ16143 134 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 GSG1Q2KHT4 349 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 AADACL4Q5VUY2 407 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 TTC23Q5W5X9 447 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 TMEM53Q6P2H8 277 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 LINC00346Q8IVM7 164 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 CCDC36Q8IYA8 594 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 ENTHD1Q8IYW4 607 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 FAM222BQ8WU58 562 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 BOD1Q96IK1 185 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 APOL4Q9BPW4 351 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 CDADC1Q9BWV3 514 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 WDR76Q9H967 626 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 OBP2BQ9NPH6 170 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 MRPL22Q9NWU5 206 aaKnown RBP10.38□□□□□ -0.75
CUX1-210ENST00000497815 ASH2LQ9UBL3 628 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 MOKQ9UQ07 419 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 DOPEY1Q5JWR5 2465 aa10.38□□□□□ -0.75
CUX1-210ENST00000497815 CCDC182A6NF36 153 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 ENTPD6O75354 484 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 CELA3BP08861 270 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 GNAO1P09471 354 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 SPARCP09486 303 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms