RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ATP5SQ99766 215 aa1.95□□□□□ -2.1
PSPC1-205ENST00000497722 SPIN2AQ99865 258 aa1.95□□□□□ -2.1
PSPC1-205ENST00000497722 SPIN2BQ9BPZ2 258 aa1.95□□□□□ -2.1
PSPC1-205ENST00000497722 RSPO3Q9BXY4 272 aaPredicted RBP1.95□□□□□ -2.1
PSPC1-205ENST00000497722 EXTL2Q9UBQ6 330 aa1.95□□□□□ -2.1
PSPC1-205ENST00000497722 LSM7Q9UK45 103 aaKnown RBP1.95□□□□□ -2.1
PSPC1-205ENST00000497722 STARD10Q9Y365 291 aa1.95□□□□□ -2.1
PSPC1-205ENST00000497722 IKBKGQ9Y6K9 419 aa1.95□□□□□ -2.1
PSPC1-205ENST00000497722 SLIT3O75094 1523 aa1.95□□□□□ -2.1
PSPC1-205ENST00000497722 CNTNAP1P78357 1384 aa1.95□□□□□ -2.1
PSPC1-205ENST00000497722 ATAD2BQ9ULI0 1458 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 A0A0U1RQS6 177 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 HEATR9A2RTY3 570 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 OR6C74A6NCV1 312 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 FAM47DPA6NHR8 397 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 H0YHG0 523 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 CXCL11O14625 94 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 RBFOX2O43251 390 aaKnown RBP eCLIP1.94□□□□□ -2.1
PSPC1-205ENST00000497722 DPM1O60762 260 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 NDUFB10O96000 172 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 BCHEP06276 602 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 ANXA5P08758 320 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 CISD3P0C7P0 127 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 TLX1NBP0CAT3 122 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 ZNF286BP0CG31 522 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 CCNB1P14635 433 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 DTYMKP23919 212 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 FOXN2P32314 431 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 PMELP40967 661 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 SSR4P51571 173 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 CCNHP51946 323 aaPredicted RBP1.94□□□□□ -2.1
PSPC1-205ENST00000497722 GPX6P59796 221 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 IFT88Q13099 833 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 COX19Q49B96 90 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 SMUG1Q53HV7 270 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 ARL9Q6T311 187 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 SLC25A48Q6ZT89 311 aaKnown RBP1.94□□□□□ -2.1
PSPC1-205ENST00000497722 ASCL5Q7RTU5 278 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 LGI3Q8N145 548 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 OR56B2PQ8NGI1 322 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 OR1S2Q8NGQ3 325 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 ZNF721Q8TF20 911 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 ABHD3Q8WU67 409 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 NTAN1Q96AB6 310 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 TUBGCP3Q96CW5 907 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 OR10C1Q96KK4 312 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 SYNDIG1Q9H7V2 258 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 METTL7AQ9H8H3 244 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 SIRT7Q9NRC8 400 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 ZNF355PQ9NSJ1 428 aa1.94□□□□□ -2.1
PSPC1-205ENST00000497722 UXTQ9UBK9 157 aaPredicted RBP1.94□□□□□ -2.1
PSPC1-205ENST00000497722 ARID1AO14497 2285 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 IGLV2-18A0A075B6J9 118 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 TRAV40A0A0B4J280 105 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 IGHV5-10-1A0A0J9YXX1 117 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 GLYATL1P3A0A0U1RQE8 302 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 A0A1W2PPV9 198 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 LRCOL1A6NCL2 159 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 RAB29O14966 203 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 RBBP9O75884 186 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 SRP72O76094 671 aaKnown RBP1.93□□□□□ -2.1
PSPC1-205ENST00000497722 PABPC4LP0CB38 370 aaKnown RBP1.93□□□□□ -2.1
PSPC1-205ENST00000497722 IGHV1-8P0DP01 117 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 ZNF250P15622 560 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 RRM2P31350 389 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 CEACAM3P40198 252 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 TNNT2P45379 298 aaPredicted RBP1.93□□□□□ -2.1
PSPC1-205ENST00000497722 RFX3P48380 749 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 ACLYP53396 1101 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 UBE2NP61088 152 aaKnown RBP1.93□□□□□ -2.1
PSPC1-205ENST00000497722 ADARB1P78563 741 aaKnown RBP1.93□□□□□ -2.1
PSPC1-205ENST00000497722 PPM1LQ5SGD2 360 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 METTL21CQ5VZV1 264 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 PRMT9Q6P2P2 845 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 DNAJC24Q6P3W2 148 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 NIPA1Q7RTP0 329 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 SNX20Q7Z614 316 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 FAM228AQ86W67 206 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 UBALD2Q8IYN6 164 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 STPG2Q8N412 459 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 MS4A15Q8N5U1 240 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 METTL13Q8N6R0 699 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 OR2L3Q8NG85 312 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 COQ8AQ8NI60 647 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 ZNF461Q8TAF7 563 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 SLC2A14Q8TDB8 520 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 LRRC29Q8WV35 223 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 ECHDC3Q96DC8 303 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 DNAJC1Q96KC8 554 aaKnown RBP1.93□□□□□ -2.1
PSPC1-205ENST00000497722 SLC29A1Q99808 456 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 CTRCQ99895 268 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 MICU1Q9BPX6 476 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 ILKAPQ9H0C8 392 aaPredicted RBP1.93□□□□□ -2.1
PSPC1-205ENST00000497722 DDX19AQ9NUU7 478 aaKnown RBP1.93□□□□□ -2.1
PSPC1-205ENST00000497722 HPCAL4Q9UM19 191 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 HYOU1Q9Y4L1 999 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 USP47Q96K76 1375 aa1.93□□□□□ -2.1
PSPC1-205ENST00000497722 TMEM223A0PJW6 202 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 TCP11X1B4DZS4 312 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 SGK1O00141 431 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms