RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 GSK3AP49840 483 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 ASTLQ6HA08 431 aaPredicted RBP11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 TMEM64Q6YI46 380 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 Q6ZRG5 221 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 ZSCAN4Q8NAM6 433 aaPredicted RBP11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 CCDC54Q8NEL0 328 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 FIBINQ8TAL6 211 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC2A12Q8TD20 617 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 GAL3ST3Q96A11 431 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC25A21Q9BQT8 299 aaPredicted RBP11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 NRSN2Q9GZP1 204 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 RSPH9Q9H1X1 276 aaPredicted RBP11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 RNF122Q9H9V4 155 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 HCFC1R1Q9NWW0 138 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 KLHDC2Q9Y2U9 406 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 A0A1B0GTI1 187 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 TBX19O60806 448 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 OR8U9P0C7N5 309 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 PI3P19957 117 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 G0S2P27469 103 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 CHAF1BQ13112 559 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 RSU1Q15404 277 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC22A6Q4U2R8 563 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF547Q8IVP9 402 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 JAGN1Q8N5M9 183 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 ADAD2Q8NCV1 583 aaKnown RBP11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 OR8U1Q8NH10 309 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 ZCCHC10Q8TBK6 192 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 SFXN5Q8TD22 340 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 TGM7Q96PF1 710 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 AICDAQ9GZX7 198 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 COMMD4Q9H0A8 199 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 FRRS1LQ9P0K9 344 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 PPIL1Q9Y3C6 166 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 URGCP-MRPS24S4R325 110 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 GRM6O15303 877 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 LRG1P02750 347 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 FOLR2P14207 255 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 HTRA3P83110 453 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 ALG10BQ5I7T1 473 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 MFSD12Q6NUT3 480 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 MTSS1LQ765P7 747 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 LYG2Q86SG7 212 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 NPAS4Q8IUM7 802 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 GVQW1Q8N7I0 195 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 POM121Q96HA1 1249 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 RBM14Q96PK6 669 aaKnown RBP11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 RNF186Q9NXI6 227 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 BTBD17A6NE02 478 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF860A6NHJ4 632 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 DUXAA6NLW8 204 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 DIO1P49895 249 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 CSNK1G2P78368 415 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 CCINQ13939 588 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 RPL7L1Q6DKI1 246 aaKnown RBP11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 LPCAT3Q6P1A2 487 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 LRRC69Q6ZNQ3 347 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 SEH1LQ96EE3 360 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 SDF2Q99470 211 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 OCSTAMPQ9BR26 566 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 HAO2Q9NYQ3 351 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 KCNG2Q9UJ96 466 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 A0A1B0GWA3 101 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 NME2P1O60361 137 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 ADAP1O75689 374 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 GPANK1O95872 356 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 REEP5Q00765 189 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 UBAC2Q8NBM4 344 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 OR13C8Q8NGS7 320 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 ALG12Q9BV10 488 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 WNT6Q9Y6F9 365 aa11.85□□□□□ -0.51
GAPVD1-220ENST00000497580 TERTO14746 1132 aaKnown RBP11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 IFNA17P01571 189 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 CRHP06850 196 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 BCL6P41182 706 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 HTR5AP47898 357 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 MLC1Q15049 377 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 SURF2Q15527 256 aaPredicted RBP11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 TRMT12Q53H54 448 aaKnown RBP11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 OR2A2Q6IF42 318 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF529Q6P280 563 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 ARRDC1Q8N5I2 433 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 OR2G2Q8NGZ5 317 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 OR8D1Q8WZ84 308 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 PHYHIPQ92561 330 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 PPP1R14AQ96A00 147 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 FAM46BQ96A09 425 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 CCDC74AQ96AQ1 378 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 CMBLQ96DG6 245 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 HS3ST2Q9Y278 367 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 PUS1Q9Y606 427 aaKnown RBP eCLIP11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 SCN5AQ14524 2016 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 C9orf170A2RU37 121 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 MBTPS2O43462 519 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 NDUFB2O95178 105 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 IFNA6P05013 189 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 NGFRP08138 427 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 OR13C7P0DN81 318 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 TSFMP43897 325 aaKnown RBP11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 GAMTQ14353 236 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms