RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 GAAP10253 952 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 GRNP28799 593 aaKnown RBP19.06■□□□□ 0.64
C9orf3-222ENST00000496567 UBE2NP61088 152 aaKnown RBP19.06■□□□□ 0.64
C9orf3-222ENST00000496567 KCNMB1Q16558 191 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 LINC01590Q5TEZ4 76 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 SSX8Q7RTT4 187 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 BCDIN3DQ7Z5W3 292 aaKnown RBP19.06■□□□□ 0.64
C9orf3-222ENST00000496567 DPPA2Q7Z7J5 298 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 SLC26A10Q8NG04 563 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 OR10H5Q8NGA6 315 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 NANOS1Q8WY41 292 aaKnown RBP19.06■□□□□ 0.64
C9orf3-222ENST00000496567 ZNF582Q96NG8 517 aaPredicted RBP19.06■□□□□ 0.64
C9orf3-222ENST00000496567 TEAD3Q99594 435 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 SLC17A5Q9NRA2 495 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 DNAJC27Q9NZQ0 273 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 NDRG3Q9UGV2 375 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 AMDHD2Q9Y303 409 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 LRRC42Q9Y546 428 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 GSTT1P30711 240 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 CDH11P55287 796 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 ISL1P61371 349 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 LSM6P62312 80 aaKnown RBP19.05■□□□□ 0.64
C9orf3-222ENST00000496567 TEKQ02763 1124 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 MAD2L1BPQ15013 274 aaPredicted RBP19.05■□□□□ 0.64
C9orf3-222ENST00000496567 SLC16A14Q7RTX9 510 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 THAP5Q7Z6K1 395 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 C11orf40Q8WZ69 217 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 HSD17B8Q92506 261 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 MUCL1Q96DR8 90 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 SH3GL3Q99963 347 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 ANKRD60Q9BZ19 345 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 Q9H521 79 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 NPDC1Q9NQX5 325 aaPredicted RBP19.05■□□□□ 0.64
C9orf3-222ENST00000496567 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.05■□□□□ 0.64
C9orf3-222ENST00000496567 USP9XQ93008 2570 aaPredicted RBP19.05■□□□□ 0.64
C9orf3-222ENST00000496567 DOPEY1Q5JWR5 2465 aa19.05■□□□□ 0.64
C9orf3-222ENST00000496567 HCFC1P51610 2035 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 ARPC4-TTLL3A0A0A6YYG9 625 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 ENTPD6O75354 484 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 MPZL1O95297 269 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 GPANK1O95872 356 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 WNT11O96014 354 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 TFP02787 698 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 CST2P09228 141 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 ZNF823P16415 610 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 PAX7P23759 505 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 HTR1FP30939 366 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 CAPZA2P47755 286 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 TMED1Q13445 227 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 SKA3Q8IX90 412 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 LRRC18Q8N456 261 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 HTRA1Q92743 480 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 WACQ9BTA9 647 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 WARS2Q9UGM6 360 aaKnown RBP19.04■□□□□ 0.64
C9orf3-222ENST00000496567 KCNG2Q9UJ96 466 aa19.04■□□□□ 0.64
C9orf3-222ENST00000496567 SPTBN1Q01082 2364 aaKnown RBP19.04■□□□□ 0.64
C9orf3-222ENST00000496567 CCDC182A6NF36 153 aa19.03■□□□□ 0.64
C9orf3-222ENST00000496567 C12orf71A8MTZ7 269 aa19.03■□□□□ 0.64
C9orf3-222ENST00000496567 SCG5P05408 212 aa19.03■□□□□ 0.64
C9orf3-222ENST00000496567 PCBD1P61457 104 aa19.03■□□□□ 0.64
C9orf3-222ENST00000496567 SLC36A2Q495M3 483 aa19.03■□□□□ 0.64
C9orf3-222ENST00000496567 ZNF511Q8NB15 262 aa19.03■□□□□ 0.64
C9orf3-222ENST00000496567 ZMYND19Q96E35 227 aaPredicted RBP19.03■□□□□ 0.64
C9orf3-222ENST00000496567 ZNF416Q9BWM5 594 aa19.03■□□□□ 0.64
C9orf3-222ENST00000496567 MARCH7Q9H992 704 aa19.03■□□□□ 0.64
C9orf3-222ENST00000496567 MOV10Q9HCE1 1003 aaKnown RBP19.03■□□□□ 0.64
C9orf3-222ENST00000496567 EMC7Q9NPA0 242 aa19.03■□□□□ 0.64
C9orf3-222ENST00000496567 MRPL22Q9NWU5 206 aaKnown RBP19.03■□□□□ 0.64
C9orf3-222ENST00000496567 POLR1DQ9Y2S0 133 aa19.03■□□□□ 0.64
C9orf3-222ENST00000496567 TVP23AA6NH52 213 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 UBL3O95164 117 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 MYF6P23409 242 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 ADAM8P78325 824 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 MEP1BQ16820 701 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.02■□□□□ 0.64
C9orf3-222ENST00000496567 SYT9Q86SS6 491 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 WDR31Q8NA23 367 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 OR52N5Q8NH56 324 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 INTS14Q96SY0 518 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 MED18Q9BUE0 208 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 CDADC1Q9BWV3 514 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 HAO2Q9NYQ3 351 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 AASSQ9UDR5 926 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 COMMD3-BMI1R4GMX3 469 aa19.02■□□□□ 0.64
C9orf3-222ENST00000496567 SH3D21A4FU49 640 aa19.02■□□□□ 0.63
C9orf3-222ENST00000496567 TUBAL3A6NHL2 446 aa19.02■□□□□ 0.63
C9orf3-222ENST00000496567 TMCC2O75069 709 aa19.02■□□□□ 0.63
C9orf3-222ENST00000496567 CD79AP11912 226 aa19.02■□□□□ 0.63
C9orf3-222ENST00000496567 AQP6Q13520 282 aa19.02■□□□□ 0.63
C9orf3-222ENST00000496567 ENDOGQ14249 297 aaKnown RBP19.02■□□□□ 0.63
C9orf3-222ENST00000496567 PPA1Q15181 289 aa19.02■□□□□ 0.63
C9orf3-222ENST00000496567 TAB1Q15750 504 aa19.02■□□□□ 0.63
C9orf3-222ENST00000496567 UGT2A3Q6UWM9 527 aa19.02■□□□□ 0.63
C9orf3-222ENST00000496567 APH1BQ8WW43 257 aa19.02■□□□□ 0.63
C9orf3-222ENST00000496567 CCNB1IP1Q9NPC3 277 aa19.02■□□□□ 0.63
C9orf3-222ENST00000496567 SLC25A15Q9Y619 301 aa19.02■□□□□ 0.63
C9orf3-222ENST00000496567 PRSS44E7EML9 344 aa19.01■□□□□ 0.63
C9orf3-222ENST00000496567 WBP4O75554 376 aaKnown RBP19.01■□□□□ 0.63
C9orf3-222ENST00000496567 HLA-HP01893 362 aa19.01■□□□□ 0.63
C9orf3-222ENST00000496567 ENTPD1P49961 510 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms