RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 C17orf100A8MU93 164 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 MT-ND5P03915 603 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 CST2P09228 141 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 DRD4P21917 467 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 FUT4P22083 530 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 GDI2P50395 445 aaKnown RBP10.91□□□□□ -0.66
PTPRF-214ENST00000496043 NUDT2P50583 147 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 PSME3P61289 254 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 PSG4Q00888 419 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 TRIP10Q15642 601 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 CR1LQ2VPA4 569 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 PCGF3Q3KNV8 242 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 ALKBH6Q3KRA9 238 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 ZNF718Q3SXZ3 478 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 ZBED5Q49AG3 693 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 TMPRSS11FQ6ZWK6 438 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 IGFN1Q86VF2 1251 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 MEX3DQ86XN8 651 aaKnown RBP10.91□□□□□ -0.66
PTPRF-214ENST00000496043 C1orf174Q8IYL3 243 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 OR1J1Q8NGS3 322 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 C1orf159Q96HA4 380 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 HSH2DQ96JZ2 352 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 POM121L2Q96KW2 1035 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 ZNF416Q9BWM5 594 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 NDEL1Q9GZM8 345 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 ANKRD19PQ9H560 264 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 NMNAT1Q9HAN9 279 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-214ENST00000496043 NKIRAS2Q9NYR9 191 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 GRHPRQ9UBQ7 328 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 RPS6KA6Q9UK32 745 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 ENPP4Q9Y6X5 453 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 C5orf49A4QMS7 147 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 PHF1O43189 567 aaPredicted RBP10.9□□□□□ -0.66
PTPRF-214ENST00000496043 PPIHO43447 177 aaKnown RBP10.9□□□□□ -0.66
PTPRF-214ENST00000496043 AHCYL1O43865 530 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 GMNNO75496 209 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 PRSS23O95084 383 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 IGHV3-13P01766 116 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 NCK1P16333 377 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 LAP3P28838 519 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 PRDX6P30041 224 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 GCH1P30793 250 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 IL2RGP31785 369 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 RPL4P36578 427 aaKnown RBP10.9□□□□□ -0.66
PTPRF-214ENST00000496043 CDH15P55291 814 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 ERVS71-1P61550 626 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 ERVK-25P63136 954 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 TEKQ02763 1124 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 FHL1Q13642 323 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 GLYATQ6IB77 296 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 IL17RELQ6ZVW7 336 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 CLDN22Q8N7P3 220 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 OR13C2Q8NGS9 318 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 AKR7LQ8NHP1 331 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 YIPF5Q969M3 257 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 TSPAN32Q96QS1 320 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 WACQ9BTA9 647 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 OR2H1Q9GZK4 316 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 MYLK2Q9H1R3 596 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 ZNF275Q9NSD4 429 aaPredicted RBP10.9□□□□□ -0.66
PTPRF-214ENST00000496043 TMEFF2Q9UIK5 374 aaPredicted RBP10.9□□□□□ -0.66
PTPRF-214ENST00000496043 TMEM5Q9Y2B1 443 aa10.9□□□□□ -0.66
PTPRF-214ENST00000496043 LOC100509620A0A075B734 347 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 A0A1W2PPL8 197 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 C12orf71A8MTZ7 269 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 B4DSR2 109 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 XKRYO14609 159 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 PTP4A3O75365 173 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 CD14P08571 375 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 PCMT1P22061 227 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 MAGEB1P43366 347 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 CCL8P80075 99 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 CCNIQ14094 377 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 ARL9Q6T311 187 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 FOXL2NBQ6ZUU3 175 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 SYT9Q86SS6 491 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 FAM156AQ8NDB6 213 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 WNT5BQ9H1J7 359 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 ELOVL3Q9HB03 270 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 DECR2Q9NUI1 292 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 ADA2Q9NZK5 511 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 ABCD2Q9UBJ2 740 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 EGFL7Q9UHF1 273 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 ATRQ13535 2644 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 MALRD1Q5VYJ5 2156 aa10.89□□□□□ -0.67
PTPRF-214ENST00000496043 A0A1W2PRQ8 180 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 COL6A5A8TX70 2615 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 CDC42EP2O14613 210 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 TPD52L2O43399 206 aaKnown RBP10.88□□□□□ -0.67
PTPRF-214ENST00000496043 NCR1O76036 304 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 TFP02787 698 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 H1F0P07305 194 aaKnown RBP10.88□□□□□ -0.67
PTPRF-214ENST00000496043 RHCEP18577 417 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 MSR1P21757 451 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 WNT5AP41221 380 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 CRYBB2P43320 205 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 GPR4P46093 362 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 ZNF81P51508 661 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 ARHGDIAP52565 204 aa10.88□□□□□ -0.67
PTPRF-214ENST00000496043 DVL1P1P54792 670 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms