RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 FAM107AO95990 144 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 CHRM4P08173 479 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF250P15622 560 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 UQCRC2P22695 453 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 GABRA5P31644 462 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 HTR6P50406 440 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 POLR2HP52434 150 aaKnown RBP8□□□□□ -1.13
SMARCAL1-213ENST00000496037 CAMK2DQ13557 499 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 IMPG1Q17R60 797 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 C6orf89Q6UWU4 347 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZER1Q7Z7L7 766 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZDHHC13Q8IUH4 622 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF519Q8TB69 540 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 PYROXD1Q8WU10 500 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 RAB40AQ8WXH6 277 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 PPCDCQ96CD2 204 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 R3HDM4Q96D70 268 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 MMADHCQ9H3L0 296 aaPredicted RBP8□□□□□ -1.13
SMARCAL1-213ENST00000496037 TMEM165Q9HC07 324 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 PALMDQ9NP74 551 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 SNTG1Q9NSN8 517 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 PPP1R14DQ9NXH3 145 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 SELENONQ9NZV5 590 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF225Q9UK10 706 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 RCE1Q9Y256 329 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 SLC35A3Q9Y2D2 325 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZC3H12DA2A288 527 aaKnown RBP7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 ANKRD61A6NGH8 418 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 C22orf46C9J442 243 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 E7ESA3 106 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 TNFRSF13BO14836 293 aaPredicted RBP7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 TM9SF1O15321 606 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 MGRN1O60291 552 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 UBL3O95164 117 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 IGHV1-46P01743 117 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 F13BP05160 661 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 GSTA1P08263 222 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 RBP1P09455 135 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 IGLL1P15814 213 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 TGFBR2P37173 567 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 IER3P46695 156 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 IDH2P48735 452 aaKnown RBP7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 CLDN17P56750 224 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 FGF12P61328 243 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 BTG1P62324 171 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 RIPK1Q13546 671 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 TP53BP2Q13625 1128 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF141Q15928 474 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 FAM153CQ494X1 144 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF813Q6ZN06 617 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 GPRIN3Q6ZVF9 776 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 FAM90A1Q86YD7 464 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 DDIASQ8IXT1 998 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 MREGQ8N565 214 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 Q8NFD4 153 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 PLEKHA8Q96JA3 519 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 Q96M66 194 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 OSBPL9Q96SU4 736 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 CDADC1Q9BWV3 514 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 TRIM15Q9C019 465 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 MID1IP1Q9NPA3 183 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 AP5S1Q9NUS5 200 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 ACOXLQ9NUZ1 547 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 SH3BP4Q9P0V3 963 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 LAMP5Q9UJQ1 280 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 OSGIN1Q9UJX0 560 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 FOXJ3Q9UPW0 622 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 RASD1Q9Y272 281 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 KCNE3Q9Y6H6 103 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 CSMD3Q7Z407 3707 aa7.99□□□□□ -1.13
SMARCAL1-213ENST00000496037 CENPVL1A0A0U1RR11 272 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 A0A1W2PQ09 198 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 AKAP8O43823 692 aaKnown RBP7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 STX11O75558 287 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 UGT2B17O75795 530 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF43P17038 809 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 TACR3P29371 465 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 STX2P32856 288 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 MDH1P40925 334 aaKnown RBP7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 ERVS71-1P61550 626 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 PAX2Q02962 417 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 EMX1Q04741 257 aaPredicted RBP7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 PMS2P3Q13401 168 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 SPDYE7PQ495Y7 208 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF385BQ569K4 471 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 CLEC6AQ6EIG7 209 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 FRRS1Q6ZNA5 592 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 LRRC28Q86X40 367 aaPredicted RBP7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 LDLRAD3Q86YD5 345 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 CCDC28AQ8IWP9 274 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 LYG1Q8N1E2 194 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 MUC20Q8N307 709 aaPredicted RBP7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 PIK3C3Q8NEB9 887 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 FAM71CQ8NEG0 241 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 OR56A1Q8NGH5 318 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 FBLIM1Q8WUP2 373 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 GEMIN6Q8WXD5 167 aaKnown RBP7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 RAB24Q969Q5 203 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms