RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SYT9Q86SS6 491 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 MDP1Q86V88 176 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 TMEM200AQ86VY9 491 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 DEPDC4Q8N2C3 294 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 PACRGLQ8N7B6 248 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 OR10H5Q8NGA6 315 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 RADILQ96JH8 1075 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 RDH12Q96NR8 316 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 SLC29A1Q99808 456 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 KCNS3Q9BQ31 491 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 VCXQ9H320 206 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 FN3KQ9H479 309 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 RASSF1Q9NS23 344 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 B3GNT2Q9NY97 397 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 NPAP1Q9NZP6 1156 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 CRNNQ9UBG3 495 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-235ENST00000495515 POLR1DQ9Y2S0 133 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 PKDREJQ9NTG1 2253 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 FAM221AA4D161 298 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 DCTN6O00399 190 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 PTHP01270 115 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 IGKV3-15P01624 115 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 HRGP04196 525 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 SPI1P17947 270 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 CD40P25942 277 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 HSF2Q03933 536 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 SLC34A1Q06495 639 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 KCNMB1Q16558 191 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 IL17RDQ8NFM7 739 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 OR9Q1Q8NGQ5 310 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 HTRA1Q92743 480 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 NMNAT2Q9BZQ4 307 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 CLEC4MQ9H2X3 399 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-235ENST00000495515 C1orf198Q9H425 327 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 RNPEPL1Q9HAU8 725 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 MOKQ9UQ07 419 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 TIMM10BQ9Y5J6 103 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 CACNA1DQ01668 2161 aa14.91□□□□□ -0.02
HDAC6-235ENST00000495515 UTP20O75691 2785 aaKnown RBP14.9□□□□□ -0.02
HDAC6-235ENST00000495515 DPRXA6NFQ7 191 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 FAM183AA6NL82 134 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 CASQ2O14958 399 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-235ENST00000495515 IGLV1-44P01699 117 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 ZNF823P16415 610 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 EPHA2P29317 976 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 FMO3P31513 532 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 PYCR1P32322 319 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 IDH3GP51553 393 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-235ENST00000495515 CDC42P60953 191 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 BSPH1Q075Z2 132 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 SCRN3Q0VDG4 424 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 LRRC36Q1X8D7 754 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 ZIK1Q3SY52 487 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-235ENST00000495515 C12orf73Q69YU5 71 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 PLBD1Q6P4A8 553 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 ALDH16A1Q8IZ83 802 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 SLC26A10Q8NG04 563 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 C11orf40Q8WZ69 217 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 FOXN4Q96NZ1 517 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 ZNF416Q9BWM5 594 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 CDADC1Q9BWV3 514 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 EMC7Q9NPA0 242 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 SMPD3Q9NY59 655 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-235ENST00000495515 ZNF224Q9NZL3 707 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 KCNG2Q9UJ96 466 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 RNF115Q9Y4L5 304 aa14.9□□□□□ -0.02
HDAC6-235ENST00000495515 IGHV1-18A0A0C4DH31 117 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 IQCMA0A1B0GVH7 501 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 ZNF503-AS2A6NEH8 195 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 FAM171A2A8MVW0 826 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 SIAH2O43255 324 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 PRODHO43272 600 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 TMCC2O75069 709 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 CRYAAP02489 173 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 SERPINA5P05154 406 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 PATE4P0C8F1 98 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 GAAP10253 952 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 PEX2P28328 305 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 POLR2IP36954 125 aaKnown RBP14.89□□□□□ -0.03
HDAC6-235ENST00000495515 TEKQ02763 1124 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 AQP6Q13520 282 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 ENDOGQ14249 297 aaKnown RBP14.89□□□□□ -0.03
HDAC6-235ENST00000495515 LPCAT4Q643R3 524 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 CXXC5Q7LFL8 322 aaKnown RBP14.89□□□□□ -0.03
HDAC6-235ENST00000495515 CPOQ8IVL8 374 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 GALNT4Q8N4A0 578 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 OR6K6Q8NGW6 343 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 HRASLS5Q96KN8 279 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 GRIP2Q9C0E4 1043 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 OR51V1Q9H2C8 321 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 TOR3AQ9H497 397 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 IMPAD1Q9NX62 359 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 H2AFY2Q9P0M6 372 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-235ENST00000495515 ADGRG4Q8IZF6 3080 aa14.89□□□□□ -0.03
HDAC6-235ENST00000495515 ABCD4O14678 606 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 TLX2O43763 284 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-235ENST00000495515 GLCEO94923 617 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 MPZL1O95297 269 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 SNAP29O95721 258 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 GYPBP06028 91 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms