RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SH3PXD2BA1X283 911 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 SERINC4A6NH21 518 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 KIF2AO00139 706 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-219ENST00000494323 AZIN1O14977 448 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 LSM1O15116 133 aaKnown RBP4.45□□□□□ -1.7
PTCD3-219ENST00000494323 EIF4E2O60573 245 aaKnown RBP4.45□□□□□ -1.7
PTCD3-219ENST00000494323 PLIN3O60664 434 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 TBX19O60806 448 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 PEX11AO75192 247 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 BCAS1O75363 584 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-219ENST00000494323 C6orf47O95873 294 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 CSTAP01040 98 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 COX5AP20674 150 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 NR4A2P43354 598 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 PDLIM4P50479 330 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 CDH12P55289 794 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 OR2B6P58173 313 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 DNAJB13P59910 316 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 CSNK2A1P68400 391 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-219ENST00000494323 SKP2Q13309 424 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 SQLEQ14534 574 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 PTGR1Q14914 329 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 MAPK14Q16539 360 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 C2orf68Q2NKX9 166 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 UGT3A2Q3SY77 523 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 HIKESHIQ53FT3 197 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 SYT14P1Q58G82 188 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 SLC25A53Q5H9E4 307 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 LRIF1Q5T3J3 769 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 C11orf87Q6NUJ2 197 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF544Q6NX49 715 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 SLC16A12Q6ZSM3 486 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 C6orf120Q7Z4R8 191 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 SPATA19Q7Z5L4 167 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 LCA5Q86VQ0 697 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 C10orf107Q8IVU9 208 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 ZCCHC24Q8N2G6 241 aaKnown RBP4.45□□□□□ -1.7
PTCD3-219ENST00000494323 KRTCAP2Q8N6L1 136 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 CCDC63Q8NA47 563 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 TEX45Q8NA69 505 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF563Q8TA94 476 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM163Q8TC26 289 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 AGR3Q8TD06 166 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 ACMSDQ8TDX5 336 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 OTULINQ96BN8 352 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 CCDC126Q96EE4 140 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 SAT2Q96F10 170 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-219ENST00000494323 RRNAD1Q96FB5 475 aaKnown RBP4.45□□□□□ -1.7
PTCD3-219ENST00000494323 METTL2AQ96IZ6 378 aaKnown RBP4.45□□□□□ -1.7
PTCD3-219ENST00000494323 OR7D2Q96RA2 312 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 CCT7Q99832 543 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 C1orf50Q9BV19 199 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 PLA2G12AQ9BZM1 189 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 OR11A1Q9GZK7 315 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 FKRPQ9H9S5 495 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 CTPS2Q9NRF8 586 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 SLC7A10Q9NS82 523 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 TAS2R16Q9NYV7 291 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 EMC3Q9P0I2 261 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 ATP6V1HQ9UI12 483 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 DNAJC15Q9Y5T4 150 aa4.45□□□□□ -1.7
PTCD3-219ENST00000494323 MGAM2Q2M2H8 2515 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 IGKV3D-15A0A087WSY6 115 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 LOC390937A0A1W2PQ73 354 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 CLDN24A6NM45 220 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 LYNX1G3V0Z9 82 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 PDLIM1O00151 329 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 NR5A2O00482 541 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 GPR171O14626 319 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 SCAMP2O15127 329 aaKnown RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 RIPK2O43353 540 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 TCF21O43680 179 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 MITFO75030 526 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 STX11O75558 287 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 UGT2B17O75795 530 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 RGS11O94810 467 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 CSF3P09919 207 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 OR4A8P0C604 315 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 LYNX1P0DP58 116 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 ITGA2P17301 1181 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 DDX5P17844 614 aaKnown RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 PGCP20142 388 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 HNF1AP20823 631 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 CHATP28329 748 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 IL2RGP31785 369 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 SRP14P37108 136 aaKnown RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 APOBEC1P41238 236 aaKnown RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 MAGEA8P43361 318 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 ASMTP46597 345 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 IDH2P48735 452 aaKnown RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 PRPS1P60891 318 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 HBA1P69905 142 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 H3F3AP84243 136 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 CKAP4Q07065 602 aaKnown RBP4.44□□□□□ -1.7
PTCD3-219ENST00000494323 LGALS3BPQ08380 585 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 PDK3Q15120 406 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF141Q15928 474 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 TSPO2Q5TGU0 170 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 IL23RQ5VWK5 629 aa4.44□□□□□ -1.7
PTCD3-219ENST00000494323 C3orf33Q6P1S2 294 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms