RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 PDP1Q9P0J1 537 aaPredicted RBP10.1□□□□□ -0.79
UBA3-211ENST00000493957 DNAJB9Q9UBS3 223 aa10.1□□□□□ -0.79
UBA3-211ENST00000493957 CR1P17927 2039 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 ARPC3O15145 178 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 SLC16A7O60669 478 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 E2F6O75461 281 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 CIB2O75838 187 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 UBL3O95164 117 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 CCL2P13500 99 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 APEHP13798 732 aaKnown RBP10.09□□□□□ -0.79
UBA3-211ENST00000493957 ZNF32P17041 273 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 LAP3P28838 519 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 CDKN1AP38936 164 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 ENDOGQ14249 297 aaKnown RBP10.09□□□□□ -0.79
UBA3-211ENST00000493957 MSMPQ1L6U9 139 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 C3orf36Q3SXR2 165 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 C1QTNF12Q5T7M4 302 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 VHLLQ6RSH7 139 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 AMIGO2Q86SJ2 522 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 CCDC36Q8IYA8 594 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 PAQR4Q8N4S7 273 aaPredicted RBP10.09□□□□□ -0.79
UBA3-211ENST00000493957 IQCF1Q8N6M8 205 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 CYB561A3Q8NBI2 242 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 OR52E2Q8NGJ4 325 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 NANOS1Q8WY41 292 aaKnown RBP10.09□□□□□ -0.79
UBA3-211ENST00000493957 PERPQ96FX8 193 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 DHRS9Q9BPW9 319 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 TSSK6Q9BXA6 273 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 RNF121Q9H920 327 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 SIAEQ9HAT2 523 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 POLE4Q9NR33 117 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 IL20Q9NYY1 176 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 REV1Q9UBZ9 1251 aa10.09□□□□□ -0.79
UBA3-211ENST00000493957 COA3Q9Y2R0 106 aaPredicted RBP10.09□□□□□ -0.79
UBA3-211ENST00000493957 IGLV1-36A0A0B4J1U3 117 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 OR6C68A6NDL8 312 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 ARRDC5A6NEK1 342 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 FAM171A2A8MVW0 826 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 NDUFS7O75251 213 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 FARS2O95363 451 aaKnown RBP10.08□□□□□ -0.8
UBA3-211ENST00000493957 RAB36O95755 333 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 CRYAAP02489 173 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.08□□□□□ -0.8
UBA3-211ENST00000493957 KPNB1Q14974 876 aaKnown RBP10.08□□□□□ -0.8
UBA3-211ENST00000493957 MEP1BQ16820 701 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 SLC36A3Q495N2 470 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 PABPC1L2AQ5JQF8 200 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 ZNF362Q5T0B9 420 aaPredicted RBP10.08□□□□□ -0.8
UBA3-211ENST00000493957 FAM27BQ5VT28 67 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 C11orf71Q6IPW1 123 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 KRT80Q6KB66 452 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.08□□□□□ -0.8
UBA3-211ENST00000493957 ADCK1Q86TW2 530 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 JAZF1Q86VZ6 243 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 OR6V1Q8N148 313 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 CPEB3Q8NE35 698 aaKnown RBP10.08□□□□□ -0.8
UBA3-211ENST00000493957 OR52L1Q8NGH7 329 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 AKR7LQ8NHP1 331 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 ZNRF4Q8WWF5 429 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 PYDC1Q8WXC3 89 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 LRTOMTQ8WZ04 291 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 DUS3LQ96G46 650 aaKnown RBP10.08□□□□□ -0.8
UBA3-211ENST00000493957 DDOQ99489 341 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 FOXC2Q99958 501 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 KCNS3Q9BQ31 491 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 TRAF4Q9BUZ4 470 aaPredicted RBP10.08□□□□□ -0.8
UBA3-211ENST00000493957 ZNF416Q9BWM5 594 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 CXXC4Q9H2H0 198 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 YY1AP1Q9H869 796 aa10.08□□□□□ -0.8
UBA3-211ENST00000493957 RPRD1BQ9NQG5 326 aaKnown RBP10.08□□□□□ -0.8
UBA3-211ENST00000493957 BEX4Q9NWD9 120 aaPredicted RBP10.08□□□□□ -0.8
UBA3-211ENST00000493957 YLPM1P49750 1951 aaKnown RBP10.08□□□□□ -0.8
UBA3-211ENST00000493957 OVOL3O00110 214 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 GPRIN2O60269 458 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 SMPD2O60906 423 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 KHDRBS3O75525 346 aaKnown RBP10.07□□□□□ -0.8
UBA3-211ENST00000493957 SERPINA5P05154 406 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 GAAP10253 952 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 NR2C1P13056 603 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 ZNF35P13682 527 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 NPR2P20594 1047 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 MSR1P21757 451 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 APEX1P27695 318 aaKnown RBP10.07□□□□□ -0.8
UBA3-211ENST00000493957 NOS3P29474 1203 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 TTKP33981 857 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 THBS4P35443 961 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 PTH2RP49190 550 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 FABP6P51161 128 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 NKX6-1P78426 367 aaPredicted RBP10.07□□□□□ -0.8
UBA3-211ENST00000493957 PSG4Q00888 419 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 SNTB2Q13425 540 aaKnown RBP10.07□□□□□ -0.8
UBA3-211ENST00000493957 ADIPOQQ15848 244 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 ATP6AP1Q15904 470 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 SLC36A2Q495M3 483 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 NRN1LQ496H8 165 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 XP32Q5T750 250 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 TMEM53Q6P2H8 277 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 SHQ1Q6PI26 577 aaKnown RBP10.07□□□□□ -0.8
UBA3-211ENST00000493957 CD300LDQ6UXZ3 194 aa10.07□□□□□ -0.8
UBA3-211ENST00000493957 DTX2Q86UW9 622 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms