RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CDH20Q9HBT6 801 aa19.5■□□□□ 0.71
SNIP1-203ENST00000493916 IL20RAQ9UHF4 553 aa19.5■□□□□ 0.71
SNIP1-203ENST00000493916 LYVE1Q9Y5Y7 322 aa19.5■□□□□ 0.71
SNIP1-203ENST00000493916 ARFGEF3Q5TH69 2177 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 IGHV4-30-2A0A087WSY4 118 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 A0A1W2PPL8 197 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 ZNF32P17041 273 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 MSR1P21757 451 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 LAP3P28838 519 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 GSSP48637 474 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 RPS6KA3P51812 740 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 C1orf94Q6P1W5 598 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 CPEB3Q8NE35 698 aaKnown RBP19.49■□□□□ 0.71
SNIP1-203ENST00000493916 VRK1Q99986 396 aaPredicted RBP19.49■□□□□ 0.71
SNIP1-203ENST00000493916 MRPL37Q9BZE1 423 aaKnown RBP19.49■□□□□ 0.71
SNIP1-203ENST00000493916 LRMDAQ9H2I8 198 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 POLE4Q9NR33 117 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 VSX1Q9NZR4 365 aaPredicted RBP19.49■□□□□ 0.71
SNIP1-203ENST00000493916 IER3IP1Q9Y5U9 82 aa19.49■□□□□ 0.71
SNIP1-203ENST00000493916 C2CD3Q4AC94 2353 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 PCSK6P29122 969 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 PCBD1P61457 104 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 RFX4Q33E94 735 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 PGBD2Q6P3X8 592 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 LINC00471Q8N535 108 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 GNPDA2Q8TDQ7 276 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 C10orf105Q8TEF2 133 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 FAM168AQ92567 244 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 CCDC124Q96CT7 223 aaKnown RBP19.48■□□□□ 0.71
SNIP1-203ENST00000493916 CLPTM1LQ96KA5 538 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 WACQ9BTA9 647 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 TRIM15Q9C019 465 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 RAB1BQ9H0U4 201 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 OR52D1Q9H346 318 aa19.48■□□□□ 0.71
SNIP1-203ENST00000493916 MYOZ1Q9NP98 299 aaPredicted RBP19.48■□□□□ 0.71
SNIP1-203ENST00000493916 A0A096LNT2 108 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 IMPA2O14732 288 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 LY6HO94772 140 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 UBOX5O94941 541 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 CCL2P13500 99 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 SLC25A16P16260 332 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 CTLA4P16410 223 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 STOMP27105 288 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 APEX1P27695 318 aaKnown RBP19.47■□□□□ 0.71
SNIP1-203ENST00000493916 SLC6A6P31641 620 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 APLNRP35414 380 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 PSG4Q00888 419 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 TSPAN31Q12999 210 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 ENDOGQ14249 297 aaKnown RBP19.47■□□□□ 0.71
SNIP1-203ENST00000493916 FAM98BQ52LJ0 330 aaKnown RBP19.47■□□□□ 0.71
SNIP1-203ENST00000493916 Q71RC1 249 aaPredicted RBP19.47■□□□□ 0.71
SNIP1-203ENST00000493916 SYT9Q86SS6 491 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 OR4C15Q8NGM1 316 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 OR2H1Q9GZK4 316 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 SYT4Q9H2B2 425 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 DYNLRB1Q9NP97 96 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 TIMM10BQ9Y5J6 103 aa19.47■□□□□ 0.71
SNIP1-203ENST00000493916 C12orf71A8MTZ7 269 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 TNFRSF11BO00300 401 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 SOCS2O14508 198 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 ACOT8O14734 319 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 ARPC3O15145 178 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 SYNGR3O43761 229 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 ERCC1P07992 297 aaPredicted RBP19.46■□□□□ 0.71
SNIP1-203ENST00000493916 IGFBP1P08833 259 aaPredicted RBP19.46■□□□□ 0.71
SNIP1-203ENST00000493916 KRTAP1-1Q07627 177 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 TRAP1Q12931 704 aaKnown RBP19.46■□□□□ 0.71
SNIP1-203ENST00000493916 DNAL1Q4LDG9 190 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 ZNF620Q6ZNG0 422 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 PTCHD4Q6ZW05 846 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 MAPK1IP1LQ8NDC0 245 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 POM121L2Q96KW2 1035 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 LRGUKQ96M69 825 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 THTPAQ9BU02 230 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 ZNF416Q9BWM5 594 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 WNT5BQ9H1J7 359 aa19.46■□□□□ 0.71
SNIP1-203ENST00000493916 NDUFS8O00217 210 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 KHDRBS3O75525 346 aaKnown RBP19.45■□□□□ 0.7
SNIP1-203ENST00000493916 STAMBPO95630 424 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 PPP1R3DO95685 299 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 SCG5P05408 212 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 FAM157BP0CG42 384 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 RAD52P43351 418 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 PDLIM4P50479 330 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 UCP2P55851 309 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 ZNF770Q6IQ21 691 aaPredicted RBP19.45■□□□□ 0.7
SNIP1-203ENST00000493916 RGS7BPQ6MZT1 257 aaPredicted RBP19.45■□□□□ 0.7
SNIP1-203ENST00000493916 AKR7LQ8NHP1 331 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 NEU4Q8WWR8 484 aaPredicted RBP19.45■□□□□ 0.7
SNIP1-203ENST00000493916 ERMAPQ96PL5 475 aaPredicted RBP19.45■□□□□ 0.7
SNIP1-203ENST00000493916 SNX18Q96RF0 628 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 SYT3Q9BQG1 590 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 BTBD10Q9BSF8 475 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 BCL2L14Q9BZR8 327 aa19.45■□□□□ 0.7
SNIP1-203ENST00000493916 M0R233 179 aa19.44■□□□□ 0.7
SNIP1-203ENST00000493916 SLC16A7O60669 478 aa19.44■□□□□ 0.7
SNIP1-203ENST00000493916 ADRA2AP08913 450 aa19.44■□□□□ 0.7
SNIP1-203ENST00000493916 CDKN2AP42771 156 aaKnown RBP19.44■□□□□ 0.7
SNIP1-203ENST00000493916 UGT2A3Q6UWM9 527 aa19.44■□□□□ 0.7
SNIP1-203ENST00000493916 LRP11Q86VZ4 500 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms