RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 TEX12Q9BXU0 123 aa15.59■□□□□ 0.09
PDLIM7-208ENST00000493815 NMNAT2Q9BZQ4 307 aa15.59■□□□□ 0.09
PDLIM7-208ENST00000493815 GRIP2Q9C0E4 1043 aa15.59■□□□□ 0.09
PDLIM7-208ENST00000493815 HINT3Q9NQE9 182 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-208ENST00000493815 B3GNT2Q9NY97 397 aa15.59■□□□□ 0.09
PDLIM7-208ENST00000493815 FKBP7Q9Y680 259 aa15.59■□□□□ 0.09
PDLIM7-208ENST00000493815 FLNBO75369 2602 aaKnown RBP15.58■□□□□ 0.09
PDLIM7-208ENST00000493815 DLGAP1O14490 977 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 CASQ2O14958 399 aaPredicted RBP15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 MGRN1O60291 552 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 HLA-DQA2P01906 255 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 SPI1P17947 270 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 MSR1P21757 451 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 PTDSS1P48651 473 aaKnown RBP15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 DAZAP2Q15038 168 aaPredicted RBP15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 GSG1Q2KHT4 349 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 OGFRL1Q5TC84 451 aaPredicted RBP15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 C12orf73Q69YU5 71 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 DNM1P34Q6PK57 102 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 BCDIN3DQ7Z5W3 292 aaKnown RBP15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 OR2T4Q8NH00 348 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 NRG4Q8WWG1 115 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 C11orf40Q8WZ69 217 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 ZNF416Q9BWM5 594 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 OR51V1Q9H2C8 321 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 OBP2BQ9NPH6 170 aa15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 HRNRQ86YZ3 2850 aaPredicted RBP15.58■□□□□ 0.08
PDLIM7-208ENST00000493815 DPRXA6NFQ7 191 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 TVP23AA6NH52 213 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 PRR23D1E9PI22 279 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 TFP02787 698 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 PRR23D2P0DMB1 279 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 GAAP10253 952 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 HOXB1P14653 301 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 IDH3GP51553 393 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 SLC25A1P53007 311 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 RAB1AP62820 205 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 BSPH1Q075Z2 132 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 ENDOGQ14249 297 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 NRN1LQ496H8 165 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 FAM27BQ5VT28 67 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 FBXW10Q5XX13 1052 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 B3GLCTQ6Y288 498 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 TCEANCQ8N8B7 351 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 UBE2FQ969M7 185 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 MS4A3Q96HJ5 214 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 IL4I1Q96RQ9 567 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 RACGAP1Q9H0H5 632 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 RNF121Q9H920 327 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 TLX2O43763 284 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 PAICSP22234 425 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 TLE4Q04727 773 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 GLO1Q04760 184 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 SPOCK1Q08629 439 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 CCDC36Q8IYA8 594 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 ZNF511Q8NB15 262 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 SLC26A10Q8NG04 563 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 OR6K6Q8NGW6 343 aa15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 NANOS1Q8WY41 292 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-208ENST00000493815 IGHV1-18A0A0C4DH31 117 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 A0A1W2PPR1 153 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 CTAG2O75638 210 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 UBL3O95164 117 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 ATP6V1G2O95670 118 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 PLAUP00749 431 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 HRGP04196 525 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 MMP7P09237 267 aaPredicted RBP15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 CBR1P16152 277 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 ZNF32P17041 273 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 LOXP28300 417 aaPredicted RBP15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 RPS27P42677 84 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 HSF2Q03933 536 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 RAB39AQ14964 217 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 SLC36A2Q495M3 483 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 KLHL12Q53G59 568 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 BEX5Q5H9J7 111 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 CXXC5Q7LFL8 322 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 FAM81AQ8TBF8 368 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 CCNB1IP1Q9NPC3 277 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 NGBQ9NPG2 151 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 MRPL22Q9NWU5 206 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 SMPD3Q9NY59 655 aaPredicted RBP15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 LRBAP50851 2863 aa15.56■□□□□ 0.08
PDLIM7-208ENST00000493815 TACC2O95359 2948 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 RAB36O95755 333 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 IGKV3-15P01624 115 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 CECR9P0C854 216 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 CD40P25942 277 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 EFNB1P98172 346 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 TEKQ02763 1124 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 NCMAPQ5T1S8 102 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 CORO6Q6QEF8 472 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 TMEM200AQ86VY9 491 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 AKR7LQ8NHP1 331 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 HRASLS5Q96KN8 279 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 ZNF75AQ96N20 296 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 PRRG3Q9BZD7 231 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 KCNN2Q9H2S1 579 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 ESRP2Q9H6T0 727 aaKnown RBP15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 WDR76Q9H967 626 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms