RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 KPNB1Q14974 876 aaKnown RBP11.09□□□□□ -0.63
CLIP2-209ENST00000493166 PGGHGQ32M88 737 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 SLC36A3Q495N2 470 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 FAM27BQ5VT28 67 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 GLB1L2Q8IW92 636 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 FBXL14Q8N1E6 418 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 ATG16L2Q8NAA4 619 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 OR2T33Q8NG76 320 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 OR4F15Q8NGB8 312 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 OR52E2Q8NGJ4 325 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 OR5K1Q8NHB7 308 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 NRBF2Q96F24 287 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 FOXN4Q96NZ1 517 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 SNX18Q96RF0 628 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 FOXC2Q99958 501 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 BDH2Q9BUT1 245 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 NUAK2Q9H093 628 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 CXorf56Q9H5V9 222 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 NTN4Q9HB63 628 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 POLE4Q9NR33 117 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 BAIAP2Q9UQB8 552 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 COA3Q9Y2R0 106 aaPredicted RBP11.09□□□□□ -0.63
CLIP2-209ENST00000493166 ARID1AO14497 2285 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 PRRC2AP48634 2157 aaKnown RBP11.09□□□□□ -0.63
CLIP2-209ENST00000493166 IQCMA0A1B0GVH7 501 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 C12orf71A8MTZ7 269 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 PTHP01270 115 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 TP53P04637 393 aaPredicted RBP11.08□□□□□ -0.64
CLIP2-209ENST00000493166 SOD3P08294 240 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 CST2P09228 141 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 MMP7P09237 267 aaPredicted RBP11.08□□□□□ -0.64
CLIP2-209ENST00000493166 DANCRP0C864 163 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 ZNF32P17041 273 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 PRKACGP22612 351 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 ACTR3P61158 418 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 PCBD1P61457 104 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 AGAP6Q5VW22 663 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 ZNF544Q6NX49 715 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 VHLLQ6RSH7 139 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 YTHDF3Q7Z739 585 aaKnown RBP11.08□□□□□ -0.64
CLIP2-209ENST00000493166 ZNF584Q8IVC4 421 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 MUC15Q8N387 334 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 LNX2Q8N448 690 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 SLC30A7Q8NEW0 376 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 OR4Q3Q8NH05 313 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 IGFBPL1Q8WX77 278 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 PYDC1Q8WXC3 89 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 LRTOMTQ8WZ04 291 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 FBXO17Q96EF6 278 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 TSSK2Q96PF2 358 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 ZNF416Q9BWM5 594 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 C1orf198Q9H425 327 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 FN3KQ9H479 309 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 EMC7Q9NPA0 242 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 RPRD1BQ9NQG5 326 aaKnown RBP11.08□□□□□ -0.64
CLIP2-209ENST00000493166 CA10Q9NS85 328 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 REV1Q9UBZ9 1251 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 ARFGEF3Q5TH69 2177 aa11.08□□□□□ -0.64
CLIP2-209ENST00000493166 TEP1Q99973 2627 aaKnown RBP11.07□□□□□ -0.64
CLIP2-209ENST00000493166 OR6C68A6NDL8 312 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 G3V2T6 193 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 TMCC2O75069 709 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 IFNGP01579 166 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 SCG5P05408 212 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 ZNF35P13682 527 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 OSMP13725 252 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 ZNF23P17027 643 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 POU1F1P28069 291 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 APOBEC3AP31941 199 aaPredicted RBP11.07□□□□□ -0.64
CLIP2-209ENST00000493166 TTKP33981 857 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 GALK2Q01415 458 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 SNTB2Q13425 540 aaKnown RBP11.07□□□□□ -0.64
CLIP2-209ENST00000493166 DAG1Q14118 895 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 ENDOGQ14249 297 aaKnown RBP11.07□□□□□ -0.64
CLIP2-209ENST00000493166 TBC1D28Q2M2D7 210 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 PABPC1L2AQ5JQF8 200 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 KRT80Q6KB66 452 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 AMIGO2Q86SJ2 522 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 DTX2Q86UW9 622 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 HIPK1Q86Z02 1210 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 OR6V1Q8N148 313 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 CYB561A3Q8NBI2 242 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 NPEPL1Q8NDH3 523 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 NUP37Q8NFH4 326 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 OR1J2Q8NGS2 313 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 AKR7LQ8NHP1 331 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 DNAJC9Q8WXX5 260 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 TRAF4Q9BUZ4 470 aaPredicted RBP11.07□□□□□ -0.64
CLIP2-209ENST00000493166 RACGAP1Q9H0H5 632 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 CDH20Q9HBT6 801 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 SRA1Q9HD15 236 aaKnown RBP11.07□□□□□ -0.64
CLIP2-209ENST00000493166 PAPOLBQ9NRJ5 636 aaKnown RBP11.07□□□□□ -0.64
CLIP2-209ENST00000493166 KLHL21Q9UJP4 597 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 B9D1Q9UPM9 204 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 POLR1DQ9Y2S0 133 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 SPEF1Q9Y4P9 236 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 FKBP7Q9Y680 259 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 CHD3Q12873 2000 aaKnown RBP11.07□□□□□ -0.64
CLIP2-209ENST00000493166 ITPR3Q14573 2671 aa11.07□□□□□ -0.64
CLIP2-209ENST00000493166 IGLV1-36A0A0B4J1U3 117 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms