RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CREB3L1Q96BA8 519 aa2.48□□□□□ -2.01
CLK1-213ENST00000492793 TM4SF18Q96CE8 201 aa2.48□□□□□ -2.01
CLK1-213ENST00000492793 LRRC58Q96CX6 371 aa2.48□□□□□ -2.01
CLK1-213ENST00000492793 NDFIP1Q9BT67 221 aa2.48□□□□□ -2.01
CLK1-213ENST00000492793 C20orf24Q9BUV8 137 aa2.48□□□□□ -2.01
CLK1-213ENST00000492793 SLC25A2Q9BXI2 301 aa2.48□□□□□ -2.01
CLK1-213ENST00000492793 ANKRA2Q9H9E1 313 aa2.48□□□□□ -2.01
CLK1-213ENST00000492793 CYTL1Q9NRR1 136 aa2.48□□□□□ -2.01
CLK1-213ENST00000492793 FAM49BQ9NUQ9 324 aa2.48□□□□□ -2.01
CLK1-213ENST00000492793 HRASLS2Q9NWW9 162 aa2.48□□□□□ -2.01
CLK1-213ENST00000492793 ZNF222Q9UK12 451 aa2.48□□□□□ -2.01
CLK1-213ENST00000492793 IGHV5-51A0A0C4DH38 117 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 IGHV3-66A0A0C4DH42 116 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 RDH16O75452 317 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 TSPAN13O95857 204 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 PABPC4LP0CB38 370 aaKnown RBP2.47□□□□□ -2.01
CLK1-213ENST00000492793 RPS2P15880 293 aaKnown RBP2.47□□□□□ -2.01
CLK1-213ENST00000492793 ZNF823P16415 610 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 PGAM1P18669 254 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 SLC1A1P43005 524 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 NAMPTP43490 491 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 CSNK1A1P48729 337 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 PRMT2P55345 433 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 RGS8P57771 180 aaPredicted RBP2.47□□□□□ -2.01
CLK1-213ENST00000492793 EIF3EP60228 445 aaKnown RBP2.47□□□□□ -2.01
CLK1-213ENST00000492793 RGNQ15493 299 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 SNRNP35Q16560 246 aaKnown RBP2.47□□□□□ -2.01
CLK1-213ENST00000492793 UBE2SQ16763 222 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 VAX1Q5SQQ9 334 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 THEM4Q5T1C6 240 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 FAM92BQ6ZTR7 304 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 SLC16A14Q7RTX9 510 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 SAXO1Q8IYX7 474 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 PGAM4Q8N0Y7 254 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 BBS5Q8N3I7 341 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 FBXL13Q8NEE6 735 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 OR7G2Q8NG99 324 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 OR10G2Q8NGC3 310 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 OR4A4PQ8NGN8 299 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 OR5W2Q8NH69 310 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 LKAAEAR1Q8TD35 194 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 ELMO1Q92556 727 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 LINC00597Q9H2U6 94 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 OR51M1Q9H341 326 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 ISYNA1Q9NPH2 558 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 CTSFQ9UBX1 484 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 ST3GAL6Q9Y274 331 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 TMED5Q9Y3A6 229 aa2.47□□□□□ -2.01
CLK1-213ENST00000492793 MN1Q10571 1320 aaPredicted RBP2.46□□□□□ -2.02
CLK1-213ENST00000492793 IGKV2-28A0A075B6P5 120 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 IGHV3-74A0A0B4J1X5 117 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 OR2AG2A6NM03 316 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 SPECC1L-ADORA2AF8WAN1 911 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 H0YHG0 523 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 MRPS12O15235 138 aaKnown RBP2.46□□□□□ -2.02
CLK1-213ENST00000492793 B4GALT5O43286 388 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 AIREO43918 545 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 HMMRO75330 724 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 SRP72O76094 671 aaKnown RBP2.46□□□□□ -2.02
CLK1-213ENST00000492793 CTDNEP1O95476 244 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 H6PDO95479 791 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 AGTP01019 485 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 IGKV2D-28P01615 120 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 HLA-DPB1P04440 258 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 TLX1NBP0CAT3 122 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 RAB3BP20337 219 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 F2RP25116 425 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 DCKP27707 260 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 GTF2E2P29084 291 aaKnown RBP2.46□□□□□ -2.02
CLK1-213ENST00000492793 SYKP43405 635 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 SLC25A11Q02978 314 aaKnown RBP2.46□□□□□ -2.02
CLK1-213ENST00000492793 MXD1Q05195 221 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 CUL2Q13617 745 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 LY6G6FQ5SQ64 297 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 SPECC1LQ69YQ0 1117 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 FAM71E1Q6IPT2 247 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 NANOGP8Q6NSW7 305 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 REEP3Q6NUK4 255 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 MBOAT1Q6ZNC8 495 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 Q6ZSR3 168 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 ZFP41Q8N8Y5 198 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 PRELID2Q8N945 189 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 ACMSDQ8TDX5 336 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 LRRC29Q8WV35 223 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 EEF1AKMT3Q96AZ1 226 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 PDXPQ96GD0 296 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 DNAJC1Q96KC8 554 aaKnown RBP2.46□□□□□ -2.02
CLK1-213ENST00000492793 WFIKKN1Q96NZ8 548 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 OR2A5Q96R48 311 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 MICU1Q9BPX6 476 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 NEK6Q9HC98 313 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 ZNF160Q9HCG1 818 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 PTTG3PQ9NZH4 202 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 CARMIL3Q8ND23 1372 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 NINLQ9Y2I6 1382 aa2.46□□□□□ -2.02
CLK1-213ENST00000492793 DENND4AQ7Z401 1863 aa2.45□□□□□ -2.02
CLK1-213ENST00000492793 CABIN1Q9Y6J0 2220 aa2.45□□□□□ -2.02
CLK1-213ENST00000492793 A0A075B6Q4 140 aa2.45□□□□□ -2.02
CLK1-213ENST00000492793 RSPH10B2B2RC85 870 aa2.45□□□□□ -2.02
CLK1-213ENST00000492793 SGK1O00141 431 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms