RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 EDNRAP25101 427 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 GABRA3P34903 492 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 HTR6P50406 440 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 MANFP55145 182 aaKnown RBP11.55□□□□□ -0.56
HDAC3-213ENST00000492506 CDH11P55287 796 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 ACSM2AQ08AH3 577 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 DBPQ10586 325 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-213ENST00000492506 LCP2Q13094 533 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 MICAQ29983 383 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 SPIN4Q56A73 249 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 XKR7Q5GH72 579 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 DDI2Q5TDH0 399 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 ACSM2BQ68CK6 577 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 CORO6Q6QEF8 472 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 KRT74Q7RTS7 529 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 GATSQ8NAP1 163 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 CLRN3Q8NCR9 226 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 C10orf105Q8TEF2 133 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 PYURFQ96I23 114 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 ARL5BQ96KC2 179 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 HRASLS5Q96KN8 279 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 ADAD1Q96M93 576 aaKnown RBP11.55□□□□□ -0.56
HDAC3-213ENST00000492506 AMDHD1Q96NU7 426 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 CDCA4Q9BXL8 241 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 SLC19A3Q9BZV2 496 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 C11orf54Q9H0W9 315 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-213ENST00000492506 DNAJC15Q9Y5T4 150 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 RPS10-NUDT3A0A1W2PQS6 291 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 ULK1O75385 1050 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 LYZL6O75951 148 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 MT-ND1P03886 318 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 ANXA4P09525 319 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-213ENST00000492506 UROSP10746 265 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 PIPP12273 146 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-213ENST00000492506 ANXA3P12429 323 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 SRD5A1P18405 259 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 SFTPDP35247 375 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 PPP3R1P63098 170 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 C2orf80Q0P641 193 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 MAD2L1Q13257 205 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-213ENST00000492506 PPA1Q15181 289 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 ZNHIT3Q15649 155 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-213ENST00000492506 PDSS1Q5T2R2 415 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 OR2T5Q6IEZ7 315 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 FAM71E1Q6IPT2 247 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 ERICH5Q6P6B1 374 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 FAM131AQ6UXB0 335 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 Q6ZSR9 355 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 Q6ZT83 130 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 IL17RELQ6ZVW7 336 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 ZAR1Q86SH2 424 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 UBE2J2Q8N2K1 259 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 EIF4E3Q8N5X7 224 aaKnown RBP11.54□□□□□ -0.56
HDAC3-213ENST00000492506 OR52H1Q8NGJ2 320 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 OR2T29Q8NH02 315 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 MARC2Q969Z3 335 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 CPNE4Q96A23 557 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-213ENST00000492506 MID1IP1Q9NPA3 183 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 KRT84Q9NSB2 600 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 CBLN4Q9NTU7 201 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 DCAF16Q9NXF7 216 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 PRSS50Q9UI38 385 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 RPS6KA6Q9UK32 745 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 U3KQV3 271 aa11.54□□□□□ -0.56
HDAC3-213ENST00000492506 PCP4L1A6NKN8 68 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 F8W036 122 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 H7C417 338 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 UBFD1O14562 309 aaKnown RBP11.53□□□□□ -0.56
HDAC3-213ENST00000492506 SCN2BO60939 215 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 NKX2-2O95096 273 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 DHFRP00374 187 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 LALBAP00709 142 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 IFNA4P05014 189 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 IFI6P09912 130 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 COX5AP20674 150 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 SDC2P34741 201 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 GGT2P36268 569 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 GSTM5P46439 218 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 HAAOP46952 286 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 OR3A2P47893 321 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 ZNF41P51814 821 aaPredicted RBP11.53□□□□□ -0.56
HDAC3-213ENST00000492506 ATP12AP54707 1039 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 ZNF763Q0D2J5 394 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 PAGE3Q5JUK9 113 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 TIMM23BQ5SRD1 257 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 FAM120AOSQ5T036 256 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 RNLSQ5VYX0 342 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 CD276Q5ZPR3 534 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 SAXO2Q658L1 398 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 FAHD1Q6P587 224 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 DLEU7Q6UYE1 221 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 FCRLAQ7L513 359 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 FBXO30Q8TB52 745 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 FAM168AQ92567 244 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 YIPF5Q969M3 257 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 COQ8BQ96D53 544 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 C3orf30Q96M34 536 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 Q96MT0 163 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 ZNF382Q96SR6 550 aa11.53□□□□□ -0.56
HDAC3-213ENST00000492506 CHCHD6Q9BRQ6 235 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms