RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 MESTQ5EB52 335 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 C10orf128Q5T292 105 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 C1QTNF12Q5T7M4 302 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 INTS11Q5TA45 600 aaKnown RBP7.57□□□□□ -1.2
HDAC3-211ENST00000491581 METTL21CQ5VZV1 264 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 TMEM53Q6P2H8 277 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 FAHD2BQ6P2I3 314 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-211ENST00000491581 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-211ENST00000491581 CCDC36Q8IYA8 594 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 ABHD4Q8TB40 342 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 ZNF519Q8TB69 540 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 TSPEARQ8WU66 669 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 STON2Q8WXE9 905 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 RASD2Q96D21 266 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 FAHD2AQ96GK7 314 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 MARS2Q96GW9 593 aaKnown RBP7.57□□□□□ -1.2
HDAC3-211ENST00000491581 FAM46AQ96IP4 442 aaKnown RBP7.57□□□□□ -1.2
HDAC3-211ENST00000491581 Q96M85 177 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 ZNF416Q9BWM5 594 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 C1QTNF5Q9BXJ0 243 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 SLC19A3Q9BZV2 496 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 MS4A5Q9H3V2 200 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 RERGLQ9H628 205 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 EGFL7Q9UHF1 273 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 HIF3AQ9Y2N7 669 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 CXCR6O00574 342 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 TPD52L2O43399 206 aaKnown RBP7.56□□□□□ -1.2
HDAC3-211ENST00000491581 DEAF1O75398 565 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-211ENST00000491581 ZNF205O95201 554 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 FARS2O95363 451 aaKnown RBP7.56□□□□□ -1.2
HDAC3-211ENST00000491581 SERPINA1P01009 418 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 ERCC1P07992 297 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-211ENST00000491581 MSMBP08118 114 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 DBHP09172 617 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 TROVE2P10155 538 aaKnown RBP eCLIP7.56□□□□□ -1.2
HDAC3-211ENST00000491581 COX4I1P13073 169 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 SELEP16581 610 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 APLNRP35414 380 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 RBM34P42696 430 aaKnown RBP7.56□□□□□ -1.2
HDAC3-211ENST00000491581 EVX1P49640 407 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 GSK3BP49841 420 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 MMP15P51511 669 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 DVL1P1P54792 670 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-211ENST00000491581 RPL27P61353 136 aaKnown RBP7.56□□□□□ -1.2
HDAC3-211ENST00000491581 SELENOWP63302 87 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 MRPS34P82930 218 aaKnown RBP7.56□□□□□ -1.2
HDAC3-211ENST00000491581 SEC23BQ15437 767 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 MEP1BQ16820 701 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 C1orf94Q6P1W5 598 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 Q6ZR03 302 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 SLC30A8Q8IWU4 369 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 ZNF540Q8NDQ6 660 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 TMEM186Q96B77 213 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 HSH2DQ96JZ2 352 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 PRRC1Q96M27 445 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 TSSK2Q96PF2 358 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 DCLRE1CQ96SD1 692 aaKnown RBP7.56□□□□□ -1.2
HDAC3-211ENST00000491581 GPA33Q99795 319 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 OR2H1Q9GZK4 316 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 TXNIPQ9H3M7 391 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 DENND2DQ9H6A0 471 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-211ENST00000491581 ZNF665Q9H7R5 613 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 CCNB1IP1Q9NPC3 277 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 BAG5Q9UL15 447 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 WIPI2Q9Y4P8 454 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 SPEF1Q9Y4P9 236 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 CAPN7Q9Y6W3 813 aa7.56□□□□□ -1.2
HDAC3-211ENST00000491581 IGHV1-69-2A0A0G2JMI3 117 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 TRBV4-1A0A0J9YWV2 114 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 IQCMA0A1B0GVH7 501 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 VSTM5A8MXK1 200 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 EFCAB9A8MZ26 197 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 DCTN6O00399 190 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 PLPP2O43688 288 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 SNAP29O95721 258 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 CTLA4P16410 223 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 HNF1AP20823 631 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 ZFP36P26651 326 aaKnown RBP7.55□□□□□ -1.2
HDAC3-211ENST00000491581 DAP3P51398 398 aaKnown RBP7.55□□□□□ -1.2
HDAC3-211ENST00000491581 ZNF81P51508 661 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 PPP1CBP62140 327 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 LCN2P80188 198 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 PRKCDQ05655 676 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 C8orf82Q6P1X6 216 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-211ENST00000491581 TMEM154Q6P9G4 183 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 PTCHD4Q6ZW05 846 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 GLCCI1Q86VQ1 547 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 JAZF1Q86VZ6 243 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 OR5AS1Q8N127 324 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 ZNF454Q8N9F8 522 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 SEMA6DQ8NFY4 1073 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 KLF14Q8TD94 323 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-211ENST00000491581 LIPHQ8WWY8 451 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 C11orf40Q8WZ69 217 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 CCL17Q92583 94 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 HPS1Q92902 700 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 TMPRSS13Q9BYE2 586 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 FN3KQ9H479 309 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 EVA1AQ9H8M9 152 aa7.55□□□□□ -1.2
HDAC3-211ENST00000491581 WDR76Q9H967 626 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms