RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 WACQ9BTA9 647 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 HDHD5Q9BXW7 423 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 MRPS18AQ9NVS2 196 aaKnown RBP16.35■□□□□ 0.21
MCF2L-230ENST00000491028 MRPL22Q9NWU5 206 aaKnown RBP16.35■□□□□ 0.21
MCF2L-230ENST00000491028 UBAP1Q9NZ09 502 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 ZNF462Q96JM2 2506 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 TVP23AA6NH52 213 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 ZG16O60844 167 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 FAM20BO75063 409 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 SEC14L2O76054 403 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 GPANK1O95872 356 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 HOXB1P14653 301 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-230ENST00000491028 ZNF823P16415 610 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 SLC15A1P46059 708 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 ENTPD1P49961 510 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 RAB40BQ12829 278 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 GABRA6Q16445 453 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 SGCAQ16586 387 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 KLHL22Q53GT1 634 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 TEX30Q5JUR7 227 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 FAM27BQ5VT28 67 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 KLHL24Q6TFL4 600 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 LYPD4Q6UWN0 246 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 B3GLCTQ6Y288 498 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 STAC2Q6ZMT1 411 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 BHLHA15Q7RTS1 189 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-230ENST00000491028 SLC16A9Q7RTY1 509 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 ERI1Q8IV48 349 aaKnown RBP16.34■□□□□ 0.21
MCF2L-230ENST00000491028 ZNF786Q8N393 782 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 BPIFB6Q8NFQ5 453 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 ITLN2Q8WWU7 325 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-230ENST00000491028 BCL2L2Q92843 193 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-230ENST00000491028 RNFT2Q96EX2 444 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 USB1Q9BQ65 265 aaKnown RBP16.34■□□□□ 0.21
MCF2L-230ENST00000491028 YTHDF1Q9BYJ9 559 aaKnown RBP16.34■□□□□ 0.21
MCF2L-230ENST00000491028 OR10A4Q9H209 315 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 GALNT8Q9NY28 637 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 SCN3BQ9NY72 215 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 CNOT2Q9NZN8 540 aaKnown RBP16.34■□□□□ 0.21
MCF2L-230ENST00000491028 BLOC1S6Q9UL45 172 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 PCDHGB5Q9Y5G0 923 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 HIVEP3Q5T1R4 2406 aa16.34■□□□□ 0.21
MCF2L-230ENST00000491028 EFCAB10A6NFE3 127 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 FAM90A27PA6NNH2 459 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 RAD51DO75771 328 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 MPZL1O95297 269 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 SCG5P05408 212 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 CST2P09228 141 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 SBK2P0C263 348 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 PIPP12273 146 aaPredicted RBP16.33■□□□□ 0.2
MCF2L-230ENST00000491028 IL32P24001 234 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 ATP6V1E1P36543 226 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 ADAM8P78325 824 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 TBRG1Q3YBR2 411 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 C1QTNF12Q5T7M4 302 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 DPPA2Q7Z7J5 298 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 CCDC36Q8IYA8 594 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 STEAP2Q8NFT2 490 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 OR51G2Q8NGK0 314 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 OR6N2Q8NGY6 317 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 MNTQ99583 582 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 YIPF3Q9GZM5 350 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 KCNN2Q9H2S1 579 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 WDR76Q9H967 626 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 ADGRL4Q9HBW9 690 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 AMBNQ9NP70 447 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 KCNJ16Q9NPI9 418 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 PSORS1C1Q9UIG5 152 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 EXOGQ9Y2C4 368 aaKnown RBP16.33■□□□□ 0.2
MCF2L-230ENST00000491028 POLR1DQ9Y2S0 133 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 TPRKBQ9Y3C4 175 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 PCDHGB1Q9Y5G3 927 aa16.33■□□□□ 0.2
MCF2L-230ENST00000491028 C12orf71A8MTZ7 269 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 XPNPEP2O43895 674 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 SELENOFO60613 162 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 TMCC2O75069 709 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 CLDN14O95500 239 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 MRPL3P09001 348 aaKnown RBP16.32■□□□□ 0.2
MCF2L-230ENST00000491028 PLA2G2AP14555 144 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 HOXC12P31275 282 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 NAA10P41227 235 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-230ENST00000491028 AQP6Q13520 282 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 ENDOGQ14249 297 aaKnown RBP16.32■□□□□ 0.2
MCF2L-230ENST00000491028 MEP1BQ16820 701 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 PCK2Q16822 640 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 SHFQ7M4L6 423 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 SLC16A14Q7RTX9 510 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 SYT9Q86SS6 491 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 NANOS1Q8WY41 292 aaKnown RBP16.32■□□□□ 0.2
MCF2L-230ENST00000491028 RNASE6Q93091 150 aaKnown RBP16.32■□□□□ 0.2
MCF2L-230ENST00000491028 LGALS12Q96DT0 336 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 ZNF416Q9BWM5 594 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 EMC7Q9NPA0 242 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 OBP2BQ9NPH6 170 aa16.32■□□□□ 0.2
MCF2L-230ENST00000491028 ARPC4-TTLL3A0A0A6YYG9 625 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 C16orf97H3BN30 126 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 FADS2O95864 444 aaKnown RBP16.31■□□□□ 0.2
MCF2L-230ENST00000491028 SPARCP09486 303 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 CRHBPP24387 322 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 PCBD1P61457 104 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms