RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 STEAP3Q658P3 488 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 GDPD3Q7L5L3 318 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 NPRL2Q8WTW4 380 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 GJD2Q9UKL4 321 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 HCFC2Q9Y5Z7 792 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 DSCR3O14972 297 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 PHF1O43189 567 aaPredicted RBP8.13□□□□□ -1.11
LSAMP-205ENST00000490035 EEF1A2Q05639 463 aaKnown RBP8.13□□□□□ -1.11
LSAMP-205ENST00000490035 OR52W1Q6IF63 320 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 H2BFWTQ7Z2G1 175 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 LRRC18Q8N456 261 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 DTWD2Q8NBA8 298 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 OR13C8Q8NGS7 320 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 SECTM1Q8WVN6 248 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 SLC17A5Q9NRA2 495 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 HDGFL3Q9Y3E1 203 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 DOCK5Q9H7D0 1870 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 SH2D1BO14796 132 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 FRS3O43559 492 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 RBP2P50120 134 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 NDFIP1Q9BT67 221 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 ZBP1Q9H171 429 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 CXorf36Q9H7Y0 433 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 HCFC1R1Q9NWW0 138 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 NSG2Q9Y328 171 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 SBK2P0C263 348 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 HCCSP53701 268 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 UBE2MP61081 183 aaKnown RBP8.13□□□□□ -1.11
LSAMP-205ENST00000490035 MLF2Q15773 248 aaPredicted RBP8.13□□□□□ -1.11
LSAMP-205ENST00000490035 HEPHL1Q6MZM0 1159 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 EDARADDQ8WWZ3 215 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 S1PR5Q9H228 398 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 P2RY12Q9H244 342 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 STARD5Q9NSY2 213 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 MYEF2Q9P2K5 600 aaKnown RBP8.13□□□□□ -1.11
LSAMP-205ENST00000490035 TRAV1-2A0A0B4J238 106 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 OR8G3PP0DMU2 310 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 SPP1P10451 314 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 ENDOGQ14249 297 aaKnown RBP8.13□□□□□ -1.11
LSAMP-205ENST00000490035 SHHQ15465 462 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 BTNL8Q6UX41 500 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 Q6ZSR9 355 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 SYT13Q7L8C5 426 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 LYSMD2Q8IV50 215 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 ADGRF3Q8IZF5 1079 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 TNFRSF13CQ96RJ3 184 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 TMEM43Q9BTV4 400 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 HIF1ANQ9NWT6 349 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 A0A0U1RQK1 487 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 B3GALNT1O75752 331 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 SCGB1D1O95968 90 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 CSF3P09919 207 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 SLC9A3R2Q15599 337 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 MEP1BQ16820 701 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 TIGITQ495A1 244 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 C4orf17Q53FE4 359 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 SLC35D2Q76EJ3 337 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 TP53INP2Q8IXH6 220 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 CARFQ8N187 725 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 COMMD1Q8N668 190 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 RBPMSQ93062 196 aaKnown RBP8.13□□□□□ -1.11
LSAMP-205ENST00000490035 RP1L1Q8IWN7 2480 aaPredicted RBP8.13□□□□□ -1.11
LSAMP-205ENST00000490035 C7orf72A4D263 438 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF705GA8MUZ8 300 aaPredicted RBP8.13□□□□□ -1.11
LSAMP-205ENST00000490035 J3QR89 54 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 GNB3P16520 340 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 CD22P20273 847 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 GPR3P46089 330 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 LGALS4P56470 323 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 RANP62826 216 aaKnown RBP8.13□□□□□ -1.11
LSAMP-205ENST00000490035 TM7SF3Q9NS93 570 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 ANKRD36A6QL64 1941 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 TAPBPO15533 448 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 DEFA4P12838 97 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SLC35A2P78381 396 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SHEQ5VZ18 495 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 UQCC3Q6UW78 93 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SIAH3Q8IW03 269 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 APH1AQ96BI3 265 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SMIM19Q96E16 107 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 C10orf90Q96M02 699 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 A0A1B0GV50 99 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SLC5A10A0PJK1 596 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 PPP5D1E7EU14 171 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 ALOX12BO75342 701 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 NPBWR1P48145 328 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 CDC20BQ86Y33 519 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 STT3BQ8TCJ2 826 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 C11orf40Q8WZ69 217 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 IER2Q9BTL4 223 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 PIGLQ9Y2B2 252 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 TIMM10BQ9Y5J6 103 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SPAG17Q6Q759 2223 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 KLK8O60259 260 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 FBXO24O75426 580 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 RPS25P62851 125 aaKnown RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 H3F3AP84243 136 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 CRMP1Q14194 572 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF761Q86XN6 746 aaPredicted RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 C3orf58Q8NDZ4 430 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms