RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 F5H0A9 414 aaPredicted RBP11.74□□□□□ -0.53
VARS-227ENST00000489979 MGRN1O60291 552 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 FMO6PO60774 539 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 SNNO75324 88 aaPredicted RBP11.74□□□□□ -0.53
VARS-227ENST00000489979 SERPINB7O75635 380 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 TRMUO75648 421 aaKnown RBP11.74□□□□□ -0.53
VARS-227ENST00000489979 LYPD3O95274 346 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 KNG1P01042 644 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 THY1P04216 161 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 ASAH2BP0C7U1 165 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 UMPSP11172 480 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 CD80P33681 288 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 PPP1CBP62140 327 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 BTG1P62324 171 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 C10orf128Q5T292 105 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 LRIF1Q5T3J3 769 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 TTC33Q6PID6 262 aaPredicted RBP11.74□□□□□ -0.53
VARS-227ENST00000489979 UNQ6126/PRO20091Q6UXV3 157 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 C17orf107Q6ZR85 190 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 C9orf139Q6ZV77 190 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 MAVSQ7Z434 540 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 NANOGNBQ7Z5D8 188 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 LRRC28Q86X40 367 aaPredicted RBP11.74□□□□□ -0.53
VARS-227ENST00000489979 KIR3DL3Q8N743 410 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 ZNF283Q8N7M2 679 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 WFDC12Q8WWY7 111 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 ZBTB9Q96C00 473 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 ARHGDIGQ99819 225 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 PKP2Q99959 881 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 EVA1AQ9H8M9 152 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 CGGBP1Q9UFW8 167 aaPredicted RBP11.74□□□□□ -0.53
VARS-227ENST00000489979 OR5V1Q9UGF6 321 aa11.74□□□□□ -0.53
VARS-227ENST00000489979 MCIDASD6RGH6 385 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 BLOC1S5-TXNDC5H3BN57 136 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 TIMM8AO60220 97 aaPredicted RBP11.73□□□□□ -0.53
VARS-227ENST00000489979 SLC2A10O95528 541 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 NGFP01138 241 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 ACADSP16219 412 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 ZNF133P52736 654 aaPredicted RBP11.73□□□□□ -0.53
VARS-227ENST00000489979 MRPS34P82930 218 aaKnown RBP11.73□□□□□ -0.53
VARS-227ENST00000489979 PSG4Q00888 419 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 CDK5R2Q13319 367 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 ZMYND11Q15326 602 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 NPTX1Q15818 432 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 ESCO2Q56NI9 601 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 ZMAT1Q5H9K5 638 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 MTX3Q5HYI7 312 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 ENTPD8Q5MY95 495 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 ANKRD42Q8N9B4 389 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 OR6T1Q8NGN1 323 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 ASB10Q8WXI3 467 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 NABP1Q96AH0 204 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 SIGLEC11Q96RL6 698 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 CCT8L2Q96SF2 557 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 SEPHS2Q99611 448 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 SLC19A3Q9BZV2 496 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 CENPHQ9H3R5 247 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 IKZF5Q9H5V7 419 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 TMEM38AQ9H6F2 299 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 VAPAQ9P0L0 249 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 UGT2A1Q9Y4X1 527 aa11.73□□□□□ -0.53
VARS-227ENST00000489979 IGKV1D-43A0A0B4J1Z2 117 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 A0A1B0GUS0 222 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 A0A1W2PRG6 482 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 CENPBD1B2RD01 187 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 H3BSA7 217 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 HOXA3O43365 443 aaPredicted RBP11.72□□□□□ -0.53
VARS-227ENST00000489979 PLATP00750 562 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 F13BP05160 661 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 PPIBP23284 216 aaKnown RBP11.72□□□□□ -0.53
VARS-227ENST00000489979 UGT2B15P54855 530 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 WDR4P57081 412 aaKnown RBP11.72□□□□□ -0.53
VARS-227ENST00000489979 ERVK-25P63136 954 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 RPL18Q07020 188 aaKnown RBP11.72□□□□□ -0.53
VARS-227ENST00000489979 PSG7Q13046 419 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 SGCAQ16586 387 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 DUSP7Q16829 419 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 TSPYL5Q86VY4 417 aaPredicted RBP11.72□□□□□ -0.53
VARS-227ENST00000489979 RBM45Q8IUH3 476 aaKnown RBP11.72□□□□□ -0.53
VARS-227ENST00000489979 C1orf174Q8IYL3 243 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 ADAMTS16Q8TE57 1224 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 NSMAFQ92636 917 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 SAMD8Q96LT4 415 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 WNT5BQ9H1J7 359 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 MMP27Q9H306 513 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 BEX1Q9HBH7 125 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 SLC7A7Q9UM01 511 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 ANGPT4Q9Y264 503 aa11.72□□□□□ -0.53
VARS-227ENST00000489979 TRAV40A0A0B4J280 105 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 CEACAM18A8MTB9 384 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 M0QZ24 198 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 TGDSO95455 350 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 OPN1SWP03999 348 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 PPIAL4GP0DN37 164 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 TNFRSF1AP19438 455 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 TNFSF4P23510 183 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 MDH2P40926 338 aaKnown RBP11.71□□□□□ -0.53
VARS-227ENST00000489979 DAP3P51398 398 aaKnown RBP11.71□□□□□ -0.53
VARS-227ENST00000489979 ARHGDIAP52565 204 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms