RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 MSR1P21757 451 aa16.35■□□□□ 0.21
MRPL55-230ENST00000489430 USF1P22415 310 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-230ENST00000489430 UCP2P55851 309 aa16.35■□□□□ 0.21
MRPL55-230ENST00000489430 SEC23BQ15437 767 aa16.35■□□□□ 0.21
MRPL55-230ENST00000489430 SGCAQ16586 387 aa16.35■□□□□ 0.21
MRPL55-230ENST00000489430 PABPC1L2AQ5JQF8 200 aa16.35■□□□□ 0.21
MRPL55-230ENST00000489430 OR52J3Q8NH60 311 aa16.35■□□□□ 0.21
MRPL55-230ENST00000489430 ZNF570Q96NI8 536 aa16.35■□□□□ 0.21
MRPL55-230ENST00000489430 REV1Q9UBZ9 1251 aa16.35■□□□□ 0.21
MRPL55-230ENST00000489430 ADAM18Q9Y3Q7 739 aa16.35■□□□□ 0.21
MRPL55-230ENST00000489430 ARFGEF3Q5TH69 2177 aa16.35■□□□□ 0.21
MRPL55-230ENST00000489430 FN1P02751 2386 aaKnown RBP16.35■□□□□ 0.21
MRPL55-230ENST00000489430 UNC119BA6NIH7 251 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 C12orf71A8MTZ7 269 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 ICMTO60725 284 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 LY6HO94772 140 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 DIRAS1O95057 198 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 ZNF250P15622 560 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 ZNF32P17041 273 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 FPR3P25089 353 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 STOMP27105 288 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 GIFP27352 417 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 MSX2P35548 267 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-230ENST00000489430 NR4A2P43354 598 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 RPS6KA3P51812 740 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 HMGA2P52926 109 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 SPIBQ01892 262 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 MOGQ16653 247 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 TMEM249Q2WGJ8 235 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 RGS7BPQ6MZT1 257 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-230ENST00000489430 SMARCD3Q6STE5 483 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 ZER1Q7Z7L7 766 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 ZNF786Q8N393 782 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 LINC00471Q8N535 108 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 CPEB3Q8NE35 698 aaKnown RBP16.34■□□□□ 0.21
MRPL55-230ENST00000489430 C11orf40Q8WZ69 217 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 Q96M85 177 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 C1orf21Q9H246 121 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 VSX1Q9NZR4 365 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-230ENST00000489430 PRPF19Q9UMS4 504 aaKnown RBP16.34■□□□□ 0.21
MRPL55-230ENST00000489430 V9GYQ6 96 aa16.34■□□□□ 0.21
MRPL55-230ENST00000489430 IGLV3-9A0A075B6K5 115 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 TEX13CA0A0J9YWL9 993 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 IMPA2O14732 288 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 IGFBP1P08833 259 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-230ENST00000489430 ADRA2AP08913 450 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 LAP3P28838 519 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 PSG4Q00888 419 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 KRR1Q13601 381 aaKnown RBP16.33■□□□□ 0.2
MRPL55-230ENST00000489430 MSMPQ1L6U9 139 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 MESTQ5EB52 335 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 ZDHHC21Q8IVQ6 265 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 PAQR4Q8N4S7 273 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-230ENST00000489430 CLDN22Q8N7P3 220 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 POM121L2Q96KW2 1035 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 OR2H1Q9GZK4 316 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 MAGIXQ9H6Y5 334 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 POLE4Q9NR33 117 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 SLCO1C1Q9NYB5 712 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 FAM53CQ9NYF3 392 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 EIF3KQ9UBQ5 218 aaKnown RBP16.33■□□□□ 0.2
MRPL55-230ENST00000489430 ADAM21Q9UKJ8 722 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 TMCC3Q9ULS5 477 aa16.33■□□□□ 0.2
MRPL55-230ENST00000489430 INAFM1C9JVW0 142 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 ARPC3O15145 178 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 COX5BP10606 129 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 DAOP14920 347 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 APEX1P27695 318 aaKnown RBP16.32■□□□□ 0.2
MRPL55-230ENST00000489430 MAGEA2P43356 314 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 GDI2P50395 445 aaKnown RBP16.32■□□□□ 0.2
MRPL55-230ENST00000489430 FXYD6P3P58550 94 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 MRPS11P82912 194 aaKnown RBP16.32■□□□□ 0.2
MRPL55-230ENST00000489430 TRIM25Q14258 630 aaKnown RBP16.32■□□□□ 0.2
MRPL55-230ENST00000489430 RFX4Q33E94 735 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 C1orf94Q6P1W5 598 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 THSD4Q6ZMP0 1018 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 SYNPRQ8TBG9 265 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 SNX18Q96RF0 628 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 SYT3Q9BQG1 590 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 TRIM15Q9C019 465 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 DUSP13Q9UII6 198 aa16.32■□□□□ 0.2
MRPL55-230ENST00000489430 A0A1W2PPL8 197 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 H3BSA7 217 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 OR10H3O60404 316 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 STAMBPO95630 424 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 CCL2P13500 99 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 TUBG1P23258 451 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 RRM2P31350 389 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 SLC6A6P31641 620 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 KLF3P57682 345 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-230ENST00000489430 LSM6P62312 80 aaKnown RBP16.31■□□□□ 0.2
MRPL55-230ENST00000489430 SCRN3Q0VDG4 424 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 LCN8Q6JVE9 175 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 ARL9Q6T311 187 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 DHFR2Q86XF0 187 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 UBASH3BQ8TF42 649 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 FOXN4Q96NZ1 517 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 GPA33Q99795 319 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 ZNF416Q9BWM5 594 aa16.31■□□□□ 0.2
MRPL55-230ENST00000489430 WNT5BQ9H1J7 359 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms