RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 RASSF2P50749 326 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 HMGA2P52926 109 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 LCN6P62502 163 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 TSPAN31Q12999 210 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 MST1LQ2TV78 715 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 RFX4Q33E94 735 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 MESTQ5EB52 335 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 PABPC1L2AQ5JQF8 200 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 OR2T5Q6IEZ7 315 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 RPL13AP3Q6NVV1 102 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 C1orf94Q6P1W5 598 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 DNM1P34Q6PK57 102 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 CLEC9AQ6UXN8 241 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 JAZF1Q86VZ6 243 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 OR52L1Q8NGH7 329 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 OR2T29Q8NH02 315 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 NABP1Q96AH0 204 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 RASD2Q96D21 266 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 ERMAPQ96PL5 475 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-218ENST00000489037 BTBD10Q9BSF8 475 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 WACQ9BTA9 647 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 IFT27Q9BW83 186 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 OR52D1Q9H346 318 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 EIF3KQ9UBQ5 218 aaKnown RBP12.34□□□□□ -0.43
BRCA1-218ENST00000489037 TIMM10BQ9Y5J6 103 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 LYVE1Q9Y5Y7 322 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 AQP12BA6NM10 295 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 GNGT2O14610 69 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 SLC16A7O60669 478 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 DNAJC8O75937 253 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-218ENST00000489037 PPP1R3DO95685 299 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 TXNDC12O95881 172 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 F12P00748 615 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-218ENST00000489037 RENP00797 406 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 MMP7P09237 267 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-218ENST00000489037 ZNF32P17041 273 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 CCNOP22674 350 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 CRABP1P29762 137 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 GSSP48637 474 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 EVX1P49640 407 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 PPOXP50336 477 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 GDI2P50395 445 aaKnown RBP12.33□□□□□ -0.44
BRCA1-218ENST00000489037 RGS7BPQ6MZT1 257 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-218ENST00000489037 THSD4Q6ZMP0 1018 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 FOXL2NBQ6ZUU3 175 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 SYT9Q86SS6 491 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 ZNF584Q8IVC4 421 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 AQP12AQ8IXF9 295 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 CIARTQ8N365 385 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-218ENST00000489037 SVOPLQ8N434 492 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 MRPL24Q96A35 216 aaKnown RBP12.33□□□□□ -0.44
BRCA1-218ENST00000489037 GPA33Q99795 319 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 SYT4Q9H2B2 425 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 POLE4Q9NR33 117 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 GPR160Q9UJ42 338 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 SAMHD1Q9Y3Z3 626 aaKnown RBP12.33□□□□□ -0.44
BRCA1-218ENST00000489037 C2CD3Q4AC94 2353 aa12.33□□□□□ -0.44
BRCA1-218ENST00000489037 ZNF469Q96JG9 3925 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-218ENST00000489037 RNF223E7ERA6 249 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 ARPC3O15145 178 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 IDH3BO43837 385 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 ATP5HO75947 161 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 SNAP29O95721 258 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 LCKP06239 509 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 CCL2P13500 99 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 STOMP27105 288 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 APEX1P27695 318 aaKnown RBP12.32□□□□□ -0.44
BRCA1-218ENST00000489037 CENPAP49450 140 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 PDLIM4P50479 330 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 RIPPLY3P57055 190 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 FLOT2Q14254 428 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 GK3PQ14409 553 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 PGBD2Q6P3X8 592 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 SPATA24Q86W54 205 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 GLB1L2Q8IW92 636 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 C11orf40Q8WZ69 217 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 FAM168AQ92567 244 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 SAMD8Q96LT4 415 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 DOK1Q99704 481 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 REG4Q9BYZ8 158 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 BCL2L14Q9BZR8 327 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 GSX1Q9H4S2 264 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-218ENST00000489037 YY1AP1Q9H869 796 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 MYOZ1Q9NP98 299 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-218ENST00000489037 VSX1Q9NZR4 365 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-218ENST00000489037 DUSP13Q9UII6 198 aa12.32□□□□□ -0.44
BRCA1-218ENST00000489037 VPS13CQ709C8 3753 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 CSPG4Q6UVK1 2322 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 DHRS12A0PJE2 317 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 ACOT8O14734 319 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 SYNGR3O43761 229 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 GPRIN2O60269 458 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 CST1P01037 141 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 FAM157BP0CG42 384 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 GSTM3P21266 225 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 PCSK6P29122 969 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 UCP2P55851 309 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 FXYD6P3P58550 94 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 PSG4Q00888 419 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 SCRN3Q0VDG4 424 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms