RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 FAM20BO75063 409 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 WBP4O75554 376 aaKnown RBP10.8□□□□□ -0.68
TRAIP-209ENST00000488860 SCG5P05408 212 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 SPARCP09486 303 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 RNF224P0DH78 156 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 OR8G3PP0DMU2 310 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 CD79AP11912 226 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 ZNF823P16415 610 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 AGAP20933 346 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 GRNP28799 593 aaKnown RBP10.8□□□□□ -0.68
TRAIP-209ENST00000488860 HTR1FP30939 366 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 CCKARP32238 428 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 ATP6V1E1P36543 226 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 RPS27P42677 84 aaKnown RBP10.8□□□□□ -0.68
TRAIP-209ENST00000488860 UBE2NP61088 152 aaKnown RBP10.8□□□□□ -0.68
TRAIP-209ENST00000488860 MRPS34P82930 218 aaKnown RBP10.8□□□□□ -0.68
TRAIP-209ENST00000488860 TEKQ02763 1124 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 HSF2Q03933 536 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 ZNF91Q05481 1191 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 CDK5R2Q13319 367 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 GABRA6Q16445 453 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 TBRG1Q3YBR2 411 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 LINC01590Q5TEZ4 76 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 ALKBH2Q6NS38 261 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 ANKRD16Q6P6B7 361 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 UGT2A3Q6UWM9 527 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 FOXL2NBQ6ZUU3 175 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 SLC16A14Q7RTX9 510 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 C1orf162Q8NEQ5 155 aaPredicted RBP10.8□□□□□ -0.68
TRAIP-209ENST00000488860 SLC26A10Q8NG04 563 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 OR51G2Q8NGK0 314 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 OR52N5Q8NH56 324 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 S100PBPQ96BU1 408 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 RNFT2Q96EX2 444 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 INTS14Q96SY0 518 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 CNN2Q99439 309 aaKnown RBP10.8□□□□□ -0.68
TRAIP-209ENST00000488860 ACTR6Q9GZN1 396 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 KCNN2Q9H2S1 579 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 AMBNQ9NP70 447 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 CCNB1IP1Q9NPC3 277 aa10.8□□□□□ -0.68
TRAIP-209ENST00000488860 MRPL22Q9NWU5 206 aaKnown RBP10.8□□□□□ -0.68
TRAIP-209ENST00000488860 WARS2Q9UGM6 360 aaKnown RBP10.8□□□□□ -0.68
TRAIP-209ENST00000488860 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRAIP-209ENST00000488860 UBR5O95071 2799 aaPredicted RBP10.79□□□□□ -0.68
TRAIP-209ENST00000488860 C16orf97H3BN30 126 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 TFP02787 698 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 PATE4P0C8F1 98 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 DBTP11182 482 aaKnown RBP10.79□□□□□ -0.68
TRAIP-209ENST00000488860 PSMB1P20618 241 aaKnown RBP10.79□□□□□ -0.68
TRAIP-209ENST00000488860 UGT2B10P36537 528 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 ENTPD1P49961 510 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 BLVRAP53004 296 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 MED21Q13503 144 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 SNTB1Q13884 538 aaKnown RBP10.79□□□□□ -0.68
TRAIP-209ENST00000488860 OR7E24Q6IFN5 339 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 LINC00346Q8IVM7 164 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 BPIFB6Q8NFQ5 453 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 STEAP2Q8NFT2 490 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 SSC4DQ8WTU2 575 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 NANOS1Q8WY41 292 aaKnown RBP10.79□□□□□ -0.68
TRAIP-209ENST00000488860 BCL2L2Q92843 193 aaPredicted RBP10.79□□□□□ -0.68
TRAIP-209ENST00000488860 TEAD3Q99594 435 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 ZNF416Q9BWM5 594 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 CDADC1Q9BWV3 514 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 RNF121Q9H920 327 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 WDR76Q9H967 626 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 SIAEQ9HAT2 523 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 PCDHGB5Q9Y5G0 923 aa10.79□□□□□ -0.68
TRAIP-209ENST00000488860 C12orf71A8MTZ7 269 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 SLC1A7O00341 560 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 DENRO43583 198 aaKnown RBP10.78□□□□□ -0.68
TRAIP-209ENST00000488860 HLA-HP01893 362 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 PSKH1P11801 424 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 MTNR1AP48039 350 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 PIGFQ07326 219 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 SRSF1Q07955 248 aaKnown RBP eCLIP10.78□□□□□ -0.68
TRAIP-209ENST00000488860 ENDOGQ14249 297 aaKnown RBP10.78□□□□□ -0.68
TRAIP-209ENST00000488860 GGTLC2Q14390 218 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 FBXL19-AS1Q494R0 122 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 SLC25A30Q5SVS4 291 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 CORO6Q6QEF8 472 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 SKA3Q8IX90 412 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 TIGD4Q8IY51 512 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 ZNF786Q8N393 782 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 C17orf78Q8N4C9 275 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 OR2AJ1Q8NGZ0 328 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 SMAP2Q8WU79 429 aaPredicted RBP10.78□□□□□ -0.68
TRAIP-209ENST00000488860 FBLIM1Q8WUP2 373 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 ZC3HAV1LQ96H79 300 aaKnown RBP10.78□□□□□ -0.68
TRAIP-209ENST00000488860 TBX5Q99593 518 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 HDHD5Q9BXW7 423 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 TTTY10Q9BZA0 68 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 ADGRL4Q9HBW9 690 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 SLC17A5Q9NRA2 495 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 ASH2LQ9UBL3 628 aa10.78□□□□□ -0.68
TRAIP-209ENST00000488860 RPL36Q9Y3U8 105 aaKnown RBP10.78□□□□□ -0.68
TRAIP-209ENST00000488860 ZNF503-AS2A6NEH8 195 aa10.77□□□□□ -0.69
TRAIP-209ENST00000488860 OR5H1A6NKK0 313 aa10.77□□□□□ -0.69
TRAIP-209ENST00000488860 ZNF593O00488 134 aaPredicted RBP10.77□□□□□ -0.69
TRAIP-209ENST00000488860 XPNPEP2O43895 674 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms