RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 CHRNA6Q15825 494 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 HSP90AA5PQ58FG0 334 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 FAM199XQ6PEV8 388 aaPredicted RBP2.77□□□□□ -1.97
ITGB1-214ENST00000488427 CD300LGQ6UXG3 332 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 IL34Q6ZMJ4 242 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 CLDN19Q8N6F1 224 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 C20orf203Q8NBC4 194 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 OR6X1Q8NH79 312 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 SRSF12Q8WXF0 261 aaKnown RBP2.77□□□□□ -1.97
ITGB1-214ENST00000488427 MYDGFQ969H8 173 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 SLC6A7Q99884 636 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 GAL3ST1Q99999 423 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 SLC35A5Q9BS91 424 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 MRPL13Q9BYD1 178 aaKnown RBP2.77□□□□□ -1.97
ITGB1-214ENST00000488427 CYTL1Q9NRR1 136 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 AIG1Q9NVV5 245 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 UGT2A1Q9Y4X1 527 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 DOCK10Q96BY6 2186 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 CR1P17927 2039 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 STAB2Q8WWQ8 2551 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 GJE1A6NN92 205 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 HIP1O00291 1037 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 PRKYO43930 277 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 ZNF780AO75290 641 aaPredicted RBP2.76□□□□□ -1.97
ITGB1-214ENST00000488427 SURF6O75683 361 aaKnown RBP2.76□□□□□ -1.97
ITGB1-214ENST00000488427 NEBLO76041 1014 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 LRATO95237 230 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 IGF1P05019 195 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 ALOX5P09917 674 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 ADRB3P13945 408 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 ATF6P18850 670 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 CAMLGP49069 296 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 PRKXP51817 358 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 SUCLG1P53597 346 aaKnown RBP2.76□□□□□ -1.97
ITGB1-214ENST00000488427 SELENOTP62341 195 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 NUCB2P80303 420 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 SYCP1Q15431 976 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 SLC5A12Q1EHB4 618 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 TFDP3Q5H9I0 405 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 CASC10Q5T4H9 136 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 C11orf71Q6IPW1 123 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 C12orf54Q6X4T0 127 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 ZNF786Q8N393 782 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 ARIH2OSQ8N7S6 290 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 OR51S1Q8NGJ8 323 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 NANPQ8TBE9 248 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 RPL3LQ92901 407 aaKnown RBP2.76□□□□□ -1.97
ITGB1-214ENST00000488427 RMND5BQ96G75 393 aaPredicted RBP2.76□□□□□ -1.97
ITGB1-214ENST00000488427 TUBGCP2Q9BSJ2 902 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 POLE3Q9NRF9 147 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 STMN3Q9NZ72 180 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 ACTR3BQ9P1U1 418 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 UXTQ9UBK9 157 aaPredicted RBP2.76□□□□□ -1.97
ITGB1-214ENST00000488427 COPS3Q9UNS2 423 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 NEU3Q9UQ49 428 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 PCLOQ9Y6V0 5065 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 TRRAPQ9Y4A5 3859 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 CHD5Q8TDI0 1954 aa2.76□□□□□ -1.97
ITGB1-214ENST00000488427 HYDINQ4G0P3 5121 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 SCN1AP35498 2009 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 IGHV3OR16-13A0A075B7E8 117 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 IGKV6-21A0A0C4DH24 114 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 A6NDX4 124 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 CCL21O00585 134 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 RNF113AO15541 343 aaKnown RBP2.75□□□□□ -1.97
ITGB1-214ENST00000488427 HCRTR1O43613 425 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 NPIPB7O75200 414 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 F10P00742 488 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 P04436 131 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 PNMA6AP0CW24 399 aaPredicted RBP2.75□□□□□ -1.97
ITGB1-214ENST00000488427 HMGA1P17096 107 aaKnown RBP2.75□□□□□ -1.97
ITGB1-214ENST00000488427 CCNCP24863 283 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 CYP2F1P24903 491 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 HNRNPH3P31942 346 aaKnown RBP2.75□□□□□ -1.97
ITGB1-214ENST00000488427 MNAT1P51948 309 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 TAS2R19P59542 299 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 DMTNQ08495 405 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 DEFB113Q30KQ7 82 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 ATL3Q6DD88 541 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 ZCCHC12Q6PEW1 402 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 AFTPHQ6ULP2 937 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 ACOT7LQ6ZUV0 252 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 ERASQ7Z444 233 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 ACOT1Q86TX2 421 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 LINC01551Q86U37 167 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 CDR2LQ86X02 465 aaPredicted RBP2.75□□□□□ -1.97
ITGB1-214ENST00000488427 Q8N9W7 124 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 ACBD4Q8NC06 268 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 CCDC112Q8NEF3 446 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 STXBP6Q8NFX7 210 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 OR2T3Q8NH03 318 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 SEC22AQ96IW7 307 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 PGLYRP4Q96LB8 373 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 FOPNLQ96NB1 174 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 XPO6Q96QU8 1125 aaKnown RBP2.75□□□□□ -1.97
ITGB1-214ENST00000488427 RNF126Q9BV68 326 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 ZNF416Q9BWM5 594 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 SPATA16Q9BXB7 569 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 POLR1EQ9GZS1 481 aaKnown RBP2.75□□□□□ -1.97
ITGB1-214ENST00000488427 ILKAPQ9H0C8 392 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms