RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 DECR2Q9NUI1 292 aa10.38□□□□□ -0.75
VPS16-208ENST00000487461 STX18Q9P2W9 335 aaKnown RBP10.38□□□□□ -0.75
VPS16-208ENST00000487461 EIF3KQ9UBQ5 218 aaKnown RBP10.38□□□□□ -0.75
VPS16-208ENST00000487461 A4GNTQ9UNA3 340 aa10.38□□□□□ -0.75
VPS16-208ENST00000487461 HIF3AQ9Y2N7 669 aa10.38□□□□□ -0.75
VPS16-208ENST00000487461 A0A0A6YYJ9 748 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 TPD52L2O43399 206 aaKnown RBP10.37□□□□□ -0.75
VPS16-208ENST00000487461 SPRY3O43610 288 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 PLPP2O43688 288 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 DEAF1O75398 565 aaPredicted RBP10.37□□□□□ -0.75
VPS16-208ENST00000487461 SASH3O75995 380 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 IFI30P13284 250 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 ANPEPP15144 967 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 MAKP20794 623 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 LAP3P28838 519 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 YAP1P46937 504 aaKnown RBP10.37□□□□□ -0.75
VPS16-208ENST00000487461 GDI2P50395 445 aaKnown RBP10.37□□□□□ -0.75
VPS16-208ENST00000487461 ZNF81P51508 661 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 MMP15P51511 669 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 ARFIP2P53365 341 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 CTXN1P60606 82 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 RPL27P61353 136 aaKnown RBP10.37□□□□□ -0.75
VPS16-208ENST00000487461 ERVK-25P63136 954 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 SELENOWP63302 87 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 CD47Q08722 323 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 ST3GAL3Q11203 375 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 FHL1Q13642 323 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 TAF11Q15544 211 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 LRRC23Q53EV4 343 aaPredicted RBP10.37□□□□□ -0.75
VPS16-208ENST00000487461 CGB2Q6NT52 195 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 IGFN1Q86VF2 1251 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 SEMA6DQ8NFY4 1073 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 SLC25A40Q8TBP6 338 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 KLF14Q8TD94 323 aaPredicted RBP10.37□□□□□ -0.75
VPS16-208ENST00000487461 BPIFA2Q96DR5 249 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 TPD52L3Q96J77 140 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 RBP7Q96R05 134 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 ALG12Q9BV10 488 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 OR2H1Q9GZK4 316 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 WNT5BQ9H1J7 359 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 GMPR2Q9P2T1 348 aaKnown RBP10.37□□□□□ -0.75
VPS16-208ENST00000487461 WIPI2Q9Y4P8 454 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 SNX13Q9Y5W8 968 aa10.37□□□□□ -0.75
VPS16-208ENST00000487461 LOC105371242A0A075B767 164 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 BBIP1A8MTZ0 92 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 FAM220BPB1ANY3 271 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 RGS9O75916 674 aaPredicted RBP10.36□□□□□ -0.75
VPS16-208ENST00000487461 MPZL1O95297 269 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 PNPP00491 289 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 NGFP01138 241 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 IGHV1-46P01743 117 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 IGHMP01871 453 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 MT-ND5P03915 603 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 SCG5P05408 212 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 CST2P09228 141 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 GCH1P30793 250 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 HFEQ30201 348 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 SPRNQ5BIV9 151 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 MBNL2Q5VZF2 373 aaKnown RBP10.36□□□□□ -0.75
VPS16-208ENST00000487461 SHQ1Q6PI26 577 aaKnown RBP10.36□□□□□ -0.75
VPS16-208ENST00000487461 FOXL2NBQ6ZUU3 175 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 MICU2Q8IYU8 434 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 OR2T12Q8NG77 320 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 OR51A7Q8NH64 312 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 IPCEF1Q8WWN9 437 aaPredicted RBP10.36□□□□□ -0.75
VPS16-208ENST00000487461 CCL17Q92583 94 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 PRRC1Q96M27 445 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 TMPRSS13Q9BYE2 586 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 OR2J1Q9GZK6 312 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 SAP30LQ9HAJ7 183 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 FGFR1OP2Q9NVK5 253 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 GID8Q9NWU2 228 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 RHCGQ9UBD6 479 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 KLHL21Q9UJP4 597 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 TIMM10BQ9Y5J6 103 aa10.36□□□□□ -0.75
VPS16-208ENST00000487461 TRAV27A0A087WT01 109 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 ELOVL7A1L3X0 281 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 HTR3EA5X5Y0 456 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 GMNCA6NCL1 334 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 ZSCAN5BA6NJL1 495 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 CLDN25C9JDP6 229 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 J3KTA2 159 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 FFAR1O14842 300 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 UBOX5O94941 541 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 IGHV2-5P01817 119 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 TROVE2P10155 538 aaKnown RBP eCLIP10.35□□□□□ -0.75
VPS16-208ENST00000487461 PPP1CBP62140 327 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 PRKCDQ05655 676 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 HNRNPA0Q13151 305 aaKnown RBP10.35□□□□□ -0.75
VPS16-208ENST00000487461 ENDOGQ14249 297 aaKnown RBP10.35□□□□□ -0.75
VPS16-208ENST00000487461 MAPRE2Q15555 327 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 FAM209AQ5JX71 171 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 ZNF774Q6NX45 483 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 C12orf54Q6X4T0 127 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 RFPL4BQ6ZWI9 263 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 VTCN1Q7Z7D3 282 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 NRMQ8IXM6 262 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 ALDH16A1Q8IZ83 802 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 PCYOX1LQ8NBM8 494 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 ZFAND2BQ8WV99 257 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms