RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CYSLTR2Q9NS75 346 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 PLEK2Q9NYT0 353 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 EIF3KQ9UBQ5 218 aaKnown RBP16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 NPTNQ9Y639 398 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 LOC100509620A0A075B734 347 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 C5orf49A4QMS7 147 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 TRAPPC13A5PLN9 417 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 CENPBD1B2RD01 187 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 MCIDASD6RGH6 385 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 BLOC1S5-TXNDC5H3BN57 136 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 TRAPPC2LH3BP13 241 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 TRMUO75648 421 aaKnown RBP16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 SLC2A10O95528 541 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 IGHV2-70P01814 119 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 IGHMP01871 453 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 F13BP05160 661 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 CDAP32320 146 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 UGT2B15P54855 530 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 MRPS34P82930 218 aaKnown RBP16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 RPL18Q07020 188 aaKnown RBP16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 ZNF154Q13106 437 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 BAMBIQ13145 260 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 AKR7LQ8NHP1 331 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 NABP1Q96AH0 204 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 MPP4Q96JB8 637 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 KCNN2Q9H2S1 579 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 MEPEQ9NQ76 525 aaPredicted RBP16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 UGT2A1Q9Y4X1 527 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 AUP1Q9Y679 476 aa16.42■□□□□ 0.22
SMPDL3A-202ENST00000487215 TANC2Q9HCD6 1990 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 A0A1W2PRG6 482 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 M0QX08 132 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 RNASE1P07998 156 aaKnown RBP16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 CD55P08174 381 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 SBK2P0C263 348 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 ACADSP16219 412 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 ZNF12P17014 697 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 RBMXP38159 391 aaKnown RBP16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 GDI2P50395 445 aaKnown RBP16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 UNQ6126/PRO20091Q6UXV3 157 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 C11orf65Q8NCR3 313 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 DCLRE1CQ96SD1 692 aaKnown RBP16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 PRSS27Q9BQR3 290 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 MSL2Q9HCI7 577 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 CGGBP1Q9UFW8 167 aaPredicted RBP16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 KLHL21Q9UJP4 597 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 ZDHHC8Q9ULC8 765 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 POLR3KQ9Y2Y1 108 aaPredicted RBP16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 INSIG2Q9Y5U4 225 aa16.41■□□□□ 0.22
SMPDL3A-202ENST00000487215 IGKV1D-43A0A0B4J1Z2 117 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 LIPAP38571 399 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 IDH3AP50213 366 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 SEC61A1P61619 476 aaKnown RBP16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 PPP1CBP62140 327 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 IL13RA1P78552 427 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 PSG4Q00888 419 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 DLEU7Q6UYE1 221 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 HDDC2Q7Z4H3 204 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 ABHD4Q8TB40 342 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 TAF15Q92804 592 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 NMD3Q96D46 503 aaKnown RBP16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 DIRC2Q96SL1 478 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 PCDHAC1Q9H158 963 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 RABEP2Q9H5N1 569 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 PATZ1Q9HBE1 687 aaKnown RBP16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 EGFL7Q9UHF1 273 aa16.4■□□□□ 0.22
SMPDL3A-202ENST00000487215 TGP01266 2768 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 POM121CA8CG34 1229 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 H3BSA7 217 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 NGFP01138 241 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 CD247P20963 164 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 DAP3P51398 398 aaKnown RBP16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 ERVK-25P63136 954 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 TNFAIP6P98066 277 aaPredicted RBP16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 FMODQ06828 376 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 MIDNQ504T8 468 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 RUNDC3AQ59EK9 446 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 ZMAT1Q5H9K5 638 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 ARMC4Q5T2S8 1044 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 C1orf174Q8IYL3 243 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 SPICQ8N5J4 248 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 NSMAFQ92636 917 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 SLC25A28Q96A46 364 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 EBF4Q9BQW3 602 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 MRI1Q9BV20 369 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 SMURF2Q9HAU4 748 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 INIPQ9NRY2 104 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 TMEM106BQ9NUM4 274 aa16.39■□□□□ 0.21
SMPDL3A-202ENST00000487215 A8MXK9 166 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 CLDN34H7C241 214 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 ICMTO60725 284 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 AQP2P41181 271 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 SLC6A9P48067 706 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 SLC9A3R2Q15599 337 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 SGCAQ16586 387 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 CYP51A1Q16850 503 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 TMEM155Q4W5P6 130 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 AGKQ53H12 422 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 KLHL36Q8N4N3 616 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 PFN4Q8NHR9 129 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms