RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 FBXL3Q9UKT7 428 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 GTF2A1LQ9UNN4 478 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 LRP12Q9Y561 859 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 EXPH5Q8NEV8 1989 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 A0A1B0GUH1 482 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 TNFRSF10AO00220 468 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 TIAF1O95411 115 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 WNT11O96014 354 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 DCTDP32321 178 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 VEGFCP49767 419 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 DAP3P51398 398 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 METTL11BQ5VVY1 283 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 NDUFAF7Q7L592 441 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 KDM8Q8N371 416 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 OR11H4Q8NGC9 324 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 OR51D1Q8NGF3 324 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 PPP1R14AQ96A00 147 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 ARL5BQ96KC2 179 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 OR6C1Q96RD1 312 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 DHDHQ9UQ10 334 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 NPTNQ9Y639 398 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 NPIPA5E9PKD4 350 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 SLC17A2O00624 439 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 ARPC1BO15143 372 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 RAD1O60671 282 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 CTAG2O75638 210 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 PTGS2P35354 604 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 ZP1P60852 638 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 OR7A5Q15622 319 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 RAB11BQ15907 218 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 ASPHD2Q6ICH7 369 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 PAPD4Q6PIY7 484 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 DNM1P34Q6PK57 102 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 SEZ6L2Q6UXD5 910 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 MAMSTRQ6ZN01 415 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 H1FNTQ75WM6 255 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 MDGA2Q7Z553 956 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 RNF138Q8WVD3 245 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 NOX3Q9HBY0 568 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 DLL4Q9NR61 685 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 MED11Q9P086 117 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 SLC23A1Q9UHI7 598 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 NPIPA1Q9UND3 350 aa16.13■□□□□ 0.17
PDLIM7-207ENST00000486828 USP34Q70CQ2 3546 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 TRBV11-1A0A0K0K1C0 115 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 GGT3PA6NGU5 568 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 NPIPB13A6NJU9 1138 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 TMEM200CA6NKL6 621 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 NPIPB4C9JG80 1138 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 M0R296 226 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 ZNF208O43345 1280 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 SRSF10O75494 262 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 SCRG1O75711 98 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 MPZL1O95297 269 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 ITGA5P08648 1049 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 IFNGR1P15260 489 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 NAGAP17050 411 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 POU3F4P49335 361 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 MAP2K6P52564 334 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 LINC00303Q3SY05 128 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 GUSBP11Q6P575 273 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 ARSKQ6UWY0 536 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 SLC26A10Q8NG04 563 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 ASB5Q8WWX0 329 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 DDIT4LQ96D03 193 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 UTP23Q9BRU9 249 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 DUSP23Q9BVJ7 150 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 SCP2D1Q9UJQ7 156 aa16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 CDV3Q9UKY7 258 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-207ENST00000486828 CPED1A4D0V7 1026 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 H7C417 338 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 ERVH48-1M5A8F1 160 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 RBBP9O75884 186 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 ZNF823P16415 610 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 EPHA8P29322 1005 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 EFNB2P52799 333 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 DCDP81605 110 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 FOXF1Q12946 379 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 CAMK2DQ13557 499 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 NR0B2Q15466 257 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 TMEM225Q6GV28 225 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 FAM166AQ6J272 317 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 FAAP20Q6NZ36 180 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 TTC9Q92623 222 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 PIGKQ92643 395 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 PMEPA1Q969W9 287 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 FAM3DQ96BQ1 224 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 KCNK17Q96T54 332 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 WDR77Q9BQA1 342 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 IER2Q9BTL4 223 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 ZNF436Q9C0F3 470 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 CHST11Q9NPF2 352 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 DIABLOQ9NR28 239 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 SLC17A5Q9NRA2 495 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 MTFP1Q9UDX5 166 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 VDAC3Q9Y277 283 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 R4GMQ9 66 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 CUL9Q8IWT3 2517 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 ARID1BQ8NFD5 2236 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 ALPK2Q86TB3 2170 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms