RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 SHROOM3Q8TF72 1996 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 PKD1L2Q7Z442 2459 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 IGKV6D-21A0A0A0MT36 114 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 TMEM150BA6NC51 233 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 GOLGA8OA6NCC3 632 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 SIGLEC16A6NMB1 481 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 ZNF716A6NP11 495 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 SPECC1L-ADORA2AF8WAN1 911 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 GOLGA8NF8WBI6 632 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 H0YJX3 145 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 GOLGA8SH3BPF8 625 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 PHF1O43189 567 aaPredicted RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 ZNF264O43296 627 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 DENRO43583 198 aaKnown RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 ZNF253O75346 499 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 SCRG1O75711 98 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 KLHL2O95198 593 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 TSPAN12O95859 305 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 ZNF735P0CB33 412 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 TAC1P20366 129 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 CASP1P29466 404 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 YWHABP31946 246 aaKnown RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 SUCLG1P53597 346 aaKnown RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 ESRRGP62508 458 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 HPCAP84074 193 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 ENPEPQ07075 957 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 SRSF5Q13243 272 aaKnown RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 MRGPRG-AS1Q2M3A8 158 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 DMRTC1Q5HYR2 192 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 METTL11BQ5VVY1 283 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 LIPNQ5VXI9 398 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 ZFP1Q6P2D0 407 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 FAM199XQ6PEV8 388 aaPredicted RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 ZNF600Q6ZNG1 722 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 ERI1Q8IV48 349 aaKnown RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 C9orf40Q8IXQ3 194 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 ZBED8Q8IZ13 594 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 ABCA7Q8IZY2 2146 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 KIF2BQ8N4N8 673 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 PSMG2Q969U7 264 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 EFHD2Q96C19 240 aaPredicted RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 ZNF707Q96C28 371 aaPredicted RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 CMTM5Q96DZ9 223 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 TIMD4Q96H15 378 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 CELF6Q96J87 481 aaKnown RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 SERPINI1Q99574 410 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 CGREF1Q99674 301 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 CITED1Q99966 193 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 NIPSNAP3BQ9BS92 247 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 GPR61Q9BZJ8 451 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 RHBGQ9H310 441 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 C8orf33Q9H7E9 229 aaPredicted RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 PARVGQ9HBI0 331 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 PARVBQ9HBI1 364 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 PLGRKTQ9HBL7 147 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 POPDC2Q9HBU9 364 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 C8orf4Q9NR00 106 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 GIN1Q9NXP7 522 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 RAB26Q9ULW5 256 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 PRPF19Q9UMS4 504 aaKnown RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 TFR2Q9UP52 801 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 PRG3Q9Y2Y8 225 aaPredicted RBP3.42□□□□□ -1.86
XPA-203ENST00000485042 SNX24Q9Y343 169 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 IFT52Q9Y366 437 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 FADS3Q9Y5Q0 445 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 NPTNQ9Y639 398 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 DENND4CQ5VZ89 1909 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 NFASCO94856 1347 aa3.42□□□□□ -1.86
XPA-203ENST00000485042 DMXL2Q8TDJ6 3036 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 CITO14578 2027 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 COL1A2P08123 1366 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 IGKV3D-15A0A087WSY6 115 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 GOLGA8QA0A0J9YX86 632 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 IQANK1A0A1B0GTG1 560 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 EXOC1LA0A1B0GW35 172 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 A0A1W2PPR1 153 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 SMIM23A6NLE4 172 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 PP2D1A8MPX8 630 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 B4DXG7 233 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 E7ESA3 106 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 I3L4J1 428 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 PRKYO43930 277 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 FAM189A1O60320 539 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 ENTPD5O75356 428 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 GPX5O75715 221 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 ATP5LO75964 103 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 AP2A1O95782 977 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 SHBGP04278 402 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 ZNF883P0CG24 379 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 SLC35E2P0CK97 266 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 RNH1P13489 461 aaKnown RBP3.41□□□□□ -1.86
XPA-203ENST00000485042 ANXA8P13928 327 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 ZNF3P17036 446 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 PRKACBP22694 351 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 IGHV1-2P23083 117 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 FGF9P31371 208 aaPredicted RBP3.41□□□□□ -1.86
XPA-203ENST00000485042 BMI1P35226 326 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 XCR1P46094 333 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 OR1G1P47890 313 aa3.41□□□□□ -1.86
XPA-203ENST00000485042 KLK7P49862 253 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms