RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 ACTR3P61158 418 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 COX10Q12887 443 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 KPNB1Q14974 876 aaKnown RBP11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 SLC36A3Q495N2 470 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 ZNF362Q5T0B9 420 aaPredicted RBP11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 C11orf71Q6IPW1 123 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 ZNF544Q6NX49 715 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 UGT2A3Q6UWM9 527 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 KRTAP1-3Q8IUG1 177 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 GLB1L2Q8IW92 636 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 LNX2Q8N448 690 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 NPEPL1Q8NDH3 523 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 NUP37Q8NFH4 326 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 IL17RDQ8NFM7 739 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 OR52E2Q8NGJ4 325 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 SNX18Q96RF0 628 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 FN3KQ9H479 309 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 EMC7Q9NPA0 242 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 CA10Q9NS85 328 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 FAIMQ9NVQ4 179 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 FBXL3Q9UKT7 428 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 ALPK2Q86TB3 2170 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 ABCA4P78363 2273 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 MPZL1O95297 269 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 RENP00797 406 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 CCL2P13500 99 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 CRABP1P29762 137 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 CDKN1AP38936 164 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 GUCA1AP43080 201 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 NKX6-1P78426 367 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 PABPC1L2AQ5JQF8 200 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 KRT80Q6KB66 452 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 AMIGO2Q86SJ2 522 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 OR6V1Q8N148 313 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 FBXL14Q8N1E6 418 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 MUC15Q8N387 334 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 PAQR4Q8N4S7 273 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 IQCF1Q8N6M8 205 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 CYB561A3Q8NBI2 242 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 CPEB3Q8NE35 698 aaKnown RBP11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 SLC30A7Q8NEW0 376 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 OR2T33Q8NG76 320 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 OR4F15Q8NGB8 312 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 AKR7LQ8NHP1 331 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 LRTOMTQ8WZ04 291 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 NRBF2Q96F24 287 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 PERPQ96FX8 193 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 DDOQ99489 341 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 GSX2Q9BZM3 304 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 RACGAP1Q9H0H5 632 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 WNT5BQ9H1J7 359 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 KCNN2Q9H2S1 579 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 CXorf56Q9H5V9 222 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 SRA1Q9HD15 236 aaKnown RBP11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 CCNB1IP1Q9NPC3 277 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 RPRD1BQ9NQG5 326 aaKnown RBP11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 ZNF701Q9NV72 531 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 B9D1Q9UPM9 204 aa11.74□□□□□ -0.53
SOX2-OT-209ENST00000485035 H3BN98 237 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 TMCC2O75069 709 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 ANKRD17O75179 2603 aaKnown RBP11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 GAAP10253 952 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 ANXA8P13928 327 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 PAX1P15863 534 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 NR4A1P22736 598 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 FASP25445 335 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 APEX1P27695 318 aaKnown RBP11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 APOBEC3AP31941 199 aaPredicted RBP11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 PTH2RP49190 550 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 PSG4Q00888 419 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 HSF2Q03933 536 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 DAG1Q14118 895 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 ADIPOQQ15848 244 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 MEP1BQ16820 701 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 MST1LQ2TV78 715 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 AGAP6Q5VW22 663 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 FAHD1Q6P587 224 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 DNM1P34Q6PK57 102 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 VHLLQ6RSH7 139 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 SPNS3Q6ZMD2 512 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 ZBTB46Q86UZ6 589 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 LRRC75A-AS1Q8N1F1 130 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 ATG16L2Q8NAA4 619 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 SLC37A3Q8NCC5 494 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 OR5K1Q8NHB7 308 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 TEX47Q8TBZ9 253 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 PYDC1Q8WXC3 89 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 C11orf40Q8WZ69 217 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 GRIP2Q9C0E4 1043 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 OR2H1Q9GZK4 316 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 ZNF556Q9HAH1 456 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 CBLN4Q9NTU7 201 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 BAIAP2Q9UQB8 552 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 FKBP7Q9Y680 259 aa11.73□□□□□ -0.53
SOX2-OT-209ENST00000485035 SPG11Q96JI7 2443 aa11.72□□□□□ -0.53
SOX2-OT-209ENST00000485035 IQCMA0A1B0GVH7 501 aa11.72□□□□□ -0.53
SOX2-OT-209ENST00000485035 C12orf71A8MTZ7 269 aa11.72□□□□□ -0.53
SOX2-OT-209ENST00000485035 FAM171A2A8MVW0 826 aa11.72□□□□□ -0.53
SOX2-OT-209ENST00000485035 GPRIN2O60269 458 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms