RNA–Protein interactions for RNA: ENST00000484958.5

FXR1-219, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-219	ENST00000484958	IFNA4	P05014	189 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	HLA-E	P13747	358 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	NCF1	P14598	390 aa	Predicted RBP	4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	ZNF250	P15622	560 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	IL1RN	P18510	177 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	MYL12A	P19105	171 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	BCL3	P20749	454 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	RPS3	P23396	243 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	SDC4	P31431	198 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	NUP62	P37198	522 aa	Predicted RBP	4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	RAB13	P51153	203 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	ARHGDIA	P52565	204 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	RAB14	P61106	215 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	RRAS2	P62070	204 aa	Predicted RBP	4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	LIPE	Q05469	1076 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	CHRNB3	Q05901	458 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	ELP6	Q0PNE2	266 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	ITPK1	Q13572	414 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	RUNX3	Q13761	415 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	PRPSAP1	Q14558	356 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	LTB4R	Q15722	352 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958		Q1RN00	199 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	QRICH1	Q2TAL8	776 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	C14orf28	Q4W4Y0	310 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	WDR25	Q64LD2	544 aa	Predicted RBP	4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	CNST	Q6PJW8	725 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	VIT	Q6UXI7	678 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	DLEU7	Q6UYE1	221 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	C16orf62	Q7Z3J2	963 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	CMC1	Q7Z7K0	106 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	FUNDC1	Q8IVP5	155 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	CNTN4	Q8IWV2	1026 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	BATF2	Q8N1L9	274 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	CHCHD4	Q8N4Q1	142 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	LINC00612	Q8N6U2	182 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	SETD7	Q8WTS6	366 aa	Known RBP	4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	LRRC58	Q96CX6	371 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	CPB2	Q96IY4	423 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	TRNT1	Q96Q11	434 aa	Known RBP	4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	ATP6V0B	Q99437	205 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	C12orf57	Q99622	126 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	PITX2	Q99697	317 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	RACGAP1	Q9H0H5	632 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	LHX5	Q9H2C1	402 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	C8orf33	Q9H7E9	229 aa	Predicted RBP	4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	IL1RL2	Q9HB29	575 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	MCCC2	Q9HCC0	563 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	RGS18	Q9NS28	235 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	HPF1	Q9NWY4	346 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	TAS2R16	Q9NYV7	291 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	BAIAP2	Q9UQB8	552 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	RNF24	Q9Y225	148 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	GINS2	Q9Y248	185 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	MFHAS1	Q9Y4C4	1052 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	GMPPB	Q9Y5P6	360 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958		V9GYH0	126 aa		4.59	□□□□□ -1.67
FXR1-219	ENST00000484958	HCFC1	P51610	2035 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	DOCK5	Q9H7D0	1870 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	TRAV6	A0A075B6T7	132 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958		A8MUA0	341 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958		H0YCG3	227 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	LRRTM2	O43300	516 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	SSX5	O60225	188 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	ZNF354A	O60765	605 aa	Predicted RBP	4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	PSIP1	O75475	530 aa	Known RBP	4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	PRAMEF12	O95522	483 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	PIGR	P01833	764 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	CDK1	P06493	297 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	SMIM6	P0DI80	62 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	ZNF3	P17036	446 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	MAG	P20916	626 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	GADD45A	P24522	165 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	PTBP1	P26599	531 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	MIP	P30301	263 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	MAP2K4	P45985	399 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	MEOX2	P50222	304 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	MFAP2	P55001	183 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	PSMD4	P55036	377 aa	Known RBP	4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	CDH6	P55285	790 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	YWHAE	P62258	255 aa	Known RBP	4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	RPS4X	P62701	263 aa	Known RBP	4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	IL5RA	Q01344	420 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	HSF2	Q03933	536 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	EMX2	Q04743	252 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	C17orf67	Q0P5P2	114 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	DGCR6	Q14129	220 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	RCAN2	Q14206	197 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	MAD2L1BP	Q15013	274 aa	Predicted RBP	4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	KYAT1	Q16773	422 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	MICA	Q29983	383 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	C17orf58	Q2M2W7	97 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	PYCR3	Q53H96	274 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	MLIP	Q5VWP3	458 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	LRRC66	Q68CR7	880 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	PLET1	Q6UQ28	207 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	TMPRSS11A	Q6ZMR5	421 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	SLC22A9	Q8IVM8	553 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	CCDC36	Q8IYA8	594 aa		4.58	□□□□□ -1.68
FXR1-219	ENST00000484958	PYROXD2	Q8N2H3	581 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms