RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 SMUG1Q53HV7 270 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 NHLRC3Q5JS37 347 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 SPOUT1Q5T280 376 aaKnown RBP4.3□□□□□ -1.72
SSBP1-211ENST00000484178 SERTAD4-AS1Q5TG53 156 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 CST9LP1Q5W188 147 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 PAQR6Q6TCH4 344 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 UNQ9370/PRO34162Q6UXP9 181 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 RBPMS2Q6ZRY4 209 aaKnown RBP4.3□□□□□ -1.72
SSBP1-211ENST00000484178 DNM1P46Q6ZS02 220 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 MTSS1LQ765P7 747 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 ZNF550Q7Z398 422 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 ABI3BPQ7Z7G0 1075 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 LHFPL3Q86UP9 236 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 TMEM173Q86WV6 379 aaPredicted RBP4.3□□□□□ -1.72
SSBP1-211ENST00000484178 TMEM17Q86X19 198 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 NRMQ8IXM6 262 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 PDZD9Q8IXQ8 264 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 SLC35F3Q8IY50 421 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 ZNF619Q8N2I2 560 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 OR2L13Q8N349 312 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 LRRC25Q8N386 305 aaPredicted RBP4.3□□□□□ -1.72
SSBP1-211ENST00000484178 RNF175Q8N4F7 328 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 IQCF1Q8N6M8 205 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 ARL6IP6Q8N6S5 226 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 OR11H7Q8NGC8 314 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 OR4D11Q8NGI4 311 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 OR2T35Q8NGX2 323 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 ZNF671Q8TAW3 534 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 NT5CQ8TCD5 201 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 RPS4Y2Q8TD47 263 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 TMEM239Q8WW34 195 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 GIMAP1Q8WWP7 306 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 RAB8BQ92930 207 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 WBP2Q969T9 261 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 SGTBQ96EQ0 304 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 SENP5Q96HI0 755 aaPredicted RBP4.3□□□□□ -1.72
SSBP1-211ENST00000484178 F2RL3Q96RI0 385 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 GFM1Q96RP9 751 aaKnown RBP4.3□□□□□ -1.72
SSBP1-211ENST00000484178 CNN2Q99439 309 aaKnown RBP4.3□□□□□ -1.72
SSBP1-211ENST00000484178 TEAD3Q99594 435 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 ABCG4Q9H172 646 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 C20orf85Q9H1P6 137 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 OR2AG1Q9H205 316 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 OR52D1Q9H346 318 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 EGLN3Q9H6Z9 239 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 GAREM1Q9H706 876 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 SFXN1Q9H9B4 322 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 ZNF334Q9HCZ1 680 aaPredicted RBP4.3□□□□□ -1.72
SSBP1-211ENST00000484178 LYRM4Q9HD34 91 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 MBNL1Q9NR56 388 aaKnown RBP4.3□□□□□ -1.72
SSBP1-211ENST00000484178 PHPT1Q9NRX4 125 aaPredicted RBP4.3□□□□□ -1.72
SSBP1-211ENST00000484178 RDH8Q9NYR8 311 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 ZNF224Q9NZL3 707 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 OR6C2Q9NZP2 312 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 MBD2Q9UBB5 411 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 TAC3Q9UHF0 121 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 CD84Q9UIB8 345 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 WDR45Q9Y484 360 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 CLDN16Q9Y5I7 305 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 TMEM14AQ9Y6G1 99 aa4.3□□□□□ -1.72
SSBP1-211ENST00000484178 TRIP12Q14669 1992 aaPredicted RBP4.3□□□□□ -1.72
SSBP1-211ENST00000484178 BPTFQ12830 3046 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 PLXNA2O75051 1894 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 LOC102723996A0A087X1L8 192 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 TRAV34A0A0B4J273 112 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 A0A0G2JK05 382 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 PLSCR5A0PG75 271 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 ANKRD20A5PA0PJZ0 165 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 MFSD2BA6NFX1 497 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 TMEM202A6NGA9 273 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 CD8B2A6NJW9 211 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 SLC9B1P1A6NJY1 282 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 ACOD1A6NK06 481 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 MPTX1A8MV57 137 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 A8MXK9 166 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 IFNL4K9M1U5 179 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 SAP18O00422 153 aaKnown RBP4.29□□□□□ -1.72
SSBP1-211ENST00000484178 ABCD4O14678 606 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 AKR7A2O43488 359 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 HCRTR2O43614 444 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 TSC22D2O75157 780 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 MTX2O75431 263 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 NDUFB6O95139 128 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 NDUFB2O95178 105 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 C1QCP02747 245 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 TFP02787 698 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 HIST1H2ABP04908 130 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 EIF4EP06730 217 aaKnown RBP4.29□□□□□ -1.72
SSBP1-211ENST00000484178 HOXB5P09067 269 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 SLC35G6P0C7Q6 338 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 UBBP0CG47 229 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 UBCP0CG48 685 aaKnown RBP4.29□□□□□ -1.72
SSBP1-211ENST00000484178 ADRB3P13945 408 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 RPA2P15927 270 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 RAB3AP20336 220 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 SLC2A5P22732 501 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 GIFP27352 417 aa4.29□□□□□ -1.72
SSBP1-211ENST00000484178 PBLDP30039 288 aaPredicted RBP4.29□□□□□ -1.72
SSBP1-211ENST00000484178 S100A11P31949 105 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms