RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 C10orf67Q8IYJ2 551 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 SLC22A24Q8N4F4 322 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 ZNF611Q8N823 705 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 PAPD5Q8NDF8 572 aaKnown RBP7.76□□□□□ -1.17
COL8A1-207ENST00000483969 NOXO1Q8NFA2 376 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 OR4C15Q8NGM1 316 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 AKAP1Q92667 903 aaKnown RBP eCLIP7.76□□□□□ -1.17
COL8A1-207ENST00000483969 HDAC2Q92769 488 aaKnown RBP7.76□□□□□ -1.17
COL8A1-207ENST00000483969 PIGTQ969N2 578 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 TSPAN32Q96QS1 320 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 GPX7Q96SL4 187 aaPredicted RBP7.76□□□□□ -1.17
COL8A1-207ENST00000483969 GPA33Q99795 319 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 KCNS3Q9BQ31 491 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 UBTD1Q9HAC8 227 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 NRIP3Q9NQ35 241 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 DNAJB9Q9UBS3 223 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 ST6GALNAC2Q9UJ37 374 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 FBXL3Q9UKT7 428 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 IER3IP1Q9Y5U9 82 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 U3KQV3 271 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 HECTD1Q9ULT8 2610 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 MED12Q93074 2177 aa7.76□□□□□ -1.17
COL8A1-207ENST00000483969 FREM3P0C091 2139 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 ABCD4O14678 606 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 HS3ST1O14792 307 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 ARPC3O15145 178 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 IDH3BO43837 385 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 TMCC2O75069 709 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 FKBP6O75344 327 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 E2F6O75461 281 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 UBL3O95164 117 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 PLAUP00749 431 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 PTHP01270 115 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 CRYAAP02489 173 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 CD79AP11912 226 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 SDHAP31040 664 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 RAB1AP62820 205 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 MYBPC1Q00872 1141 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 SLC36A2Q495M3 483 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 ZNF672Q499Z4 452 aaPredicted RBP7.75□□□□□ -1.17
COL8A1-207ENST00000483969 C10orf128Q5T292 105 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 TMEM53Q6P2H8 277 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 SLC25A47Q6Q0C1 308 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 VHLLQ6RSH7 139 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 SLC22A25Q6T423 547 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 PAMR1Q6UXH9 720 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 RASSF6Q6ZTQ3 369 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 ASRGL1Q7L266 308 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 WDFY1Q8IWB7 410 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 SKA3Q8IX90 412 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 AQP11Q8NBQ7 271 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 ZNF519Q8TB69 540 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 GIPC3Q8TF64 312 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 SAMD8Q96LT4 415 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 Q96M85 177 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 ZNF570Q96NI8 536 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 ERMAPQ96PL5 475 aaPredicted RBP7.75□□□□□ -1.17
COL8A1-207ENST00000483969 SLC38A2Q96QD8 506 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 IFT27Q9BW83 186 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 OR52D1Q9H346 318 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 NELFAQ9H3P2 528 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 LIME1Q9H400 295 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 RNF121Q9H920 327 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 SIAEQ9HAT2 523 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 TMEM38BQ9NVV0 291 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 B3GNT2Q9NY97 397 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 CISD1Q9NZ45 108 aaKnown RBP7.75□□□□□ -1.17
COL8A1-207ENST00000483969 NPAP1Q9NZP6 1156 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 CRNNQ9UBG3 495 aaPredicted RBP7.75□□□□□ -1.17
COL8A1-207ENST00000483969 POU2F3Q9UKI9 436 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 ITGB1BP2Q9UKP3 347 aa7.75□□□□□ -1.17
COL8A1-207ENST00000483969 IGHV1-18A0A0C4DH31 117 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 TEX13CA0A0J9YWL9 993 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 A0A1W2PPR1 153 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 SLC22A23A1A5C7 686 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 PRSS37A4D1T9 235 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 KHDRBS3O75525 346 aaKnown RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 SEC14L2O76054 403 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 RAB36O95755 333 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 TXNDC12O95881 172 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 IGKV3-15P01624 115 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 HLA-HP01893 362 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 B4GALT1P15291 398 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 ZNF26P17031 533 aaPredicted RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 IST1P53990 364 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 TUBA1BP68363 451 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 TUBA4AP68366 448 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 MRPS34P82930 218 aaKnown RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 PIGFQ07326 219 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 PPP1R8Q12972 351 aaKnown RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 SGCAQ16586 387 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 GSG1Q2KHT4 349 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 ZNF770Q6IQ21 691 aaPredicted RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 DNM1P34Q6PK57 102 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 CD300LDQ6UXZ3 194 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 TUBA1AQ71U36 451 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 SLC16A14Q7RTX9 510 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 FAM122BQ7Z309 247 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 ADCK1Q86TW2 530 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 CLDN22Q8N7P3 220 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms