RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 PTGER4P35408 488 aa9.46□□□□□ -0.89
COL12A1-207ENST00000483888 BLKP51451 505 aa9.46□□□□□ -0.89
COL12A1-207ENST00000483888 TMEM35AQ53FP2 167 aa9.46□□□□□ -0.89
COL12A1-207ENST00000483888 DPPA3Q6W0C5 159 aa9.46□□□□□ -0.89
COL12A1-207ENST00000483888 FAM163AQ96GL9 167 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-207ENST00000483888 FAAP24Q9BTP7 215 aa9.46□□□□□ -0.89
COL12A1-207ENST00000483888 DUSP21Q9H596 190 aa9.46□□□□□ -0.89
COL12A1-207ENST00000483888 SNHG28P0DPA3 235 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 SULT1A1P50225 295 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 DAP3P51398 398 aaKnown RBP9.46□□□□□ -0.9
COL12A1-207ENST00000483888 RBMXL3Q8N7X1 1067 aaKnown RBP9.46□□□□□ -0.9
COL12A1-207ENST00000483888 NUDCD2Q8WVJ2 157 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 OR8B4Q96RC9 309 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 SMIM35A0A1B0GVV1 85 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 VSTM2BA6NLU5 285 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 ERVS71-1P61550 626 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 PLGLAQ15195 96 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 SLC36A2Q495M3 483 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 CMTM4Q8IZR5 234 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 MARVELD1Q9BSK0 173 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 TBXA2RP21731 343 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 ELOBQ15370 118 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 PLCXD3Q63HM9 321 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 DDIT4LQ96D03 193 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 B3GALT5Q9Y2C3 310 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 TRIP12Q14669 1992 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-207ENST00000483888 SCN3AQ9NY46 2000 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 PRSS56P0CW18 603 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 RPL7P18124 248 aaKnown RBP9.46□□□□□ -0.9
COL12A1-207ENST00000483888 DCTDP32321 178 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 ATP6V1FQ16864 119 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 SYT14P1Q58G82 188 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 ETFBKMTQ8IXQ9 262 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 ZNF100Q8IYN0 542 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 OR1F2PQ96R84 312 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 GPA33Q99795 319 aa9.46□□□□□ -0.9
COL12A1-207ENST00000483888 OR1Q1Q15612 314 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 DND1Q8IYX4 353 aaKnown RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 OPALINQ96PE5 141 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 OR14J1Q9UGF5 321 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 NXT1Q9UKK6 140 aaKnown RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 PPP1R3CQ9UQK1 317 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 GPR55Q9Y2T6 319 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 AIFM1O95831 613 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 LCATP04180 440 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 WASP42768 502 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 ELAVL1Q15717 326 aaKnown RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 GSG1Q2KHT4 349 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 XAF1Q6GPH4 301 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 GSN-AS1Q9NRJ2 163 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 SCN4AP35499 1836 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 C2orf72A6NCS6 295 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 HMSDA8MTL9 139 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 MPPED1O15442 326 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 SUSD5O60279 629 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 UGDHO60701 494 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 GAGE10A6NGK3 116 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 GLCEO94923 617 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 OPN1MWP04001 364 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 IL5P05113 134 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 OPN1MW2P0DN77 364 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 OPN1MW3P0DN78 364 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 OR9A2Q8NGT5 310 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 CYB5D2Q8WUJ1 264 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 ZNF558Q96NG5 402 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 C1QTNF6Q9BXI9 259 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 NAT8BQ9UHF3 227 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 KNL1Q8NG31 2342 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 CDRT15L2A8MXV6 281 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 PTP4A3O75365 173 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 CRYABP02511 175 aaKnown RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 VRK2Q86Y07 508 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 RAB6CQ9H0N0 254 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 GLB1P16278 677 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 TYRP1P17643 537 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 UBE2G1P62253 170 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 LINC00303Q3SY05 128 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 PELI3Q8N2H9 469 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 OR2AE1Q8NHA4 323 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 NAA11Q9BSU3 229 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 OR52A1Q9UKL2 312 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 SLC22A7Q9Y694 548 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 ACTR1BP42025 376 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 AMTP48728 403 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 ZNF157P51786 506 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 LGALSLQ3ZCW2 172 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 RAB6CQ53S08 254 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 MMABQ96EY8 250 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 C2orf50Q96LR7 162 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 P2RX7Q99572 595 aaKnown RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 GPR20Q99678 358 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 DEC1Q9P2X7 70 aa9.45□□□□□ -0.9
COL12A1-207ENST00000483888 MRPS28Q9Y2Q9 187 aaKnown RBP9.45□□□□□ -0.9
COL12A1-207ENST00000483888 ALOX5APP20292 161 aa9.44□□□□□ -0.9
COL12A1-207ENST00000483888 IKZF1Q13422 519 aa9.44□□□□□ -0.9
COL12A1-207ENST00000483888 ANKRD16Q6P6B7 361 aa9.44□□□□□ -0.9
COL12A1-207ENST00000483888 PAQR6Q6TCH4 344 aa9.44□□□□□ -0.9
COL12A1-207ENST00000483888 SLC16A14Q7RTX9 510 aa9.44□□□□□ -0.9
COL12A1-207ENST00000483888 SLC22A24Q8N4F4 322 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms