RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	TEAD3	Q99594	435 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	RERGL	Q9H628	205 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	ZNF226	Q9NYT6	803 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	HCFC1	P51610	2035 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	SLC22A31	A6NKX4	558 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	FAM183A	A6NL82	134 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	UBL3	O95164	117 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	ARR3	P36575	388 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	TEK	Q02763	1124 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	ZNF691	Q5VV52	312 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	MEPCE	Q7L2J0	689 aa	Known RBP	13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	SLC16A14	Q7RTX9	510 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	SKA3	Q8IX90	412 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	WDR31	Q8NA23	367 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	SLC26A10	Q8NG04	563 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	FAM222B	Q8WU58	562 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	NABP1	Q96AH0	204 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	OTULIN	Q96BN8	352 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	WFIKKN1	Q96NZ8	548 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	PSMG3-AS1	Q96PY0	264 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	IL4I1	Q96RQ9	567 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	OR51V1	Q9H2C8	321 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	MARCH7	Q9H992	704 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	B3GNT2	Q9NY97	397 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	WARS2	Q9UGM6	360 aa	Known RBP	13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	SLC25A15	Q9Y619	301 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	SPTAN1	Q13813	2472 aa	Known RBP	13.42	□□□□□ -0.26
CCM2-215	ENST00000482714		A0A1W2PPL8	197 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	PRSS44	E7EML9	344 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	CASK	O14936	926 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	GOSR1	O95249	250 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	GAA	P10253	952 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	EPX	P11678	715 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	B4GALT1	P15291	398 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	CBR1	P16152	277 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	ZNF823	P16415	610 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	GABRB1	P18505	474 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	SLC2A5	P22732	501 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	CDA	P32320	146 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	KIR2DL3	P43628	341 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	AQP4	P55087	323 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	ISL1	P61371	349 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	TAB1	Q15750	504 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	LCN1P1	Q5VSP4	162 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	USP51	Q70EK9	711 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	IL17RD	Q8NFM7	739 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	OR9Q1	Q8NGQ5	310 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	C11orf40	Q8WZ69	217 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	MED18	Q9BUE0	208 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	CDADC1	Q9BWV3	514 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	HCAR1	Q9BXC0	346 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	CLN6	Q9NWW5	311 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	RAB26	Q9ULW5	256 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	TIMM10B	Q9Y5J6	103 aa		13.42	□□□□□ -0.26
CCM2-215	ENST00000482714	UTP20	O75691	2785 aa	Known RBP	13.41	□□□□□ -0.26
CCM2-215	ENST00000482714		A0A096LPE4	126 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714		A0A1W2PPZ6	126 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	SH3D21	A4FU49	640 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	PTH	P01270	115 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	HLA-DQA2	P01906	255 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	TF	P02787	698 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	GSTT1	P30711	240 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	HTR1F	P30939	366 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	CCKAR	P32238	428 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	RAB1A	P62820	205 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	PPA1	Q15181	289 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	TSC22D1	Q15714	1073 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	PCK2	Q16822	640 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	HIKESHI	Q53FT3	197 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	KLHL12	Q53G59	568 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	SP5	Q6BEB4	398 aa	Predicted RBP	13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	TMEM53	Q6P2H8	277 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	IZUMO2	Q6UXV1	221 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	RHOU	Q7L0Q8	258 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	SHF	Q7M4L6	423 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	ENTHD1	Q8IYW4	607 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	ALDH16A1	Q8IZ83	802 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	OR10H5	Q8NGA6	315 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	UBE2F	Q969M7	185 aa		13.41	□□□□□ -0.26
CCM2-215	ENST00000482714	CLU	P10909	449 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	GRN	P28799	593 aa	Known RBP	13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	PYCR1	P32322	319 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	CSNK2B	P67870	215 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	SCRN3	Q0VDG4	424 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	POU4F2	Q12837	409 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	AQP6	Q13520	282 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	APOF	Q13790	326 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	DAZAP2	Q15038	168 aa	Predicted RBP	13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	GSG1	Q2KHT4	349 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	THAP5	Q7Z6K1	395 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	GJC3	Q8NFK1	279 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	ZNRF4	Q8WWF5	429 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	MNT	Q99583	582 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	ZNF184	Q99676	751 aa	Predicted RBP	13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	SH3GL3	Q99963	347 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	ZNF416	Q9BWM5	594 aa		13.4	□□□□□ -0.26
CCM2-215	ENST00000482714	C1orf198	Q9H425	327 aa		13.4	□□□□□ -0.26

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